Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1416 ATGAAGTACATTCGGACCAACAGCTTGAAGAGGCTTTTCTCGTTTGGAAGGCGAAGTTTCTGTGAAGAAAAAGATGTGGGACCTGTGATTGTTCTTCAACATGAAGAAGAACACCCTCCAAGACCCTCTTGGAAATGCTTCTCCTATGAACAGTTGTTTGATGCCACCAATGGCTTCAGCTCAGAAAATCTGGTTGGAAAAGGAGGGTATGCTGAGGTTTACAAAGGGATGCTTAAAAACTGTAGTGGTGAGGAAATAGCTGTGAAGAGGCTCACAAGAACTTCGAGGGATGAGAGGAAGGAGAAGGATTTTCTGACAGAGATTGGAACAATTGGTCACGTGCAACACCCCAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTCTATCTCGTTTTTGAGCTTTCAACTGTTGGTTCTGTTGCTTCTGTTATTCATGATGAGGGAGTGGCTCCTGTGGATTGGAAAACAAGGCACAAGATAGCACTTGGGACAGCAAGAGGCCTCCACTATTTGCACAAAGGCTGCCAGAGAAGGATAATCCATAGGGACATCAAGGCCTCAAACATTCTATTGACAGCAGATTTTGAACCACAGATATCCGATTTTGGACTAGCAAAGTGGCTTCCATCTGAGTGGACTCATCATTCAATAGCACCAATAGAAGGGACATTTGGACATTTGGCACCTGAGTACTATATGCATGGAGTTGTGGACGAGAAGACAGATGTATTTGCATTTGGTGTGTTCTTGCTAGAAGTCATCTCCGGGAGGAAACCCGTGGATGGATCTTACCAAAGCTTGCATGCCTGGGCTAAACCAATATTGAACAAAGGGGAAGTTGAGGAGCTAGTAGATCCAAGGCTCGAAGGAGCTTATGATGTAACACAGTTTAAAAGACTTGCCTTTGCAGCCTCTCTGTGCATCCGGGCATCTTCAATTTGGAGACCTACCATGAGCGAGGTATTAGAGGTAATGGAGGAGGGCGAGATTGACAAAGAGAAGTGGGAAATGGCCGAGGAAGAAGTGCAAGAGGAGCAATTCAGGGGTTTTGAGGATTTGGAATGTGAATATGACAGTTCGTTTTCAATGTCTTTACCTGATTCTATTGGAAGTATTTAG 1128 0.4468 MKYIRTNSLKRLFSFGRRSFCEEKDVGPVIVLQHEEEHPPRPSWKCFSYEQLFDATNGFSSENLVGKGGYAEVYKGMLKNCSGEEIAVKRLTRTSRDERKEKDFLTEIGTIGHVQHPNVLPLLGCCIDNGLYLVFELSTVGSVASVIHDEGVAPVDWKTRHKIALGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSEWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEVISGRKPVDGSYQSLHAWAKPILNKGEVEELVDPRLEGAYDVTQFKRLAFAASLCIRASSIWRPTMSEVLEVMEEGEIDKEKWEMAEEEVQEEQFRGFEDLECEYDSSFSMSLPDSIGSI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1416 375 PANTHER OS08G0249100 PROTEIN 30 357 - -
Dod03g1416 375 SUPERFAMILY Protein kinase-like (PK-like) 38 328 IPR011009 -
Dod03g1416 375 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Dod03g1416 375 ProSiteProfiles Protein kinase domain profile. 59 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1416 375 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1416 375 Gene3D Phosphorylase Kinase; domain 1 30 137 - -
Dod03g1416 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Dod03g1416 375 PANTHER OS04G0654600 PROTEIN 30 357 - -
Dod03g1416 375 Pfam Protein tyrosine and serine/threonine kinase 62 266 IPR001245 GO:0004672|GO:0006468
Dod03g1416 375 Gene3D Transferase(Phosphotransferase) domain 1 139 355 - -
Dod03g1416 375 Coils Coil 328 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1416 Dod-Chr3 18365526 18369543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1416 47 363 Trihelix Transcription Factor Family AT4G32710 42.553 1.01e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod03g1416 PK_Tyr_Ser-Thr 4.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1416 - - gmx:100801765 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2256 05 48668799 48673363 Dod03g1416 03 18365526 18369543 PCT