Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1395 TCCTTGTGGCTGTTATTATCGCCGCCATCATCGGCACCATTGTACACAACTGTCGCTCCTCCAACGACAGCTTCGCCCCCTCAACACAGCTGAAGCTCAAAGCCACCGCCAGTGTCCAGAAGGCCATCGACGTATGCGGAACCGTCCTTAGCGATGTCGTACCCAACTTCAACGACCTTGTGTCTGAGCTCGGCGGCGGCGCAAAGCTCCTCCTGGCGACGAAGATCAACGACATTGAGACGTGGCTGAGCACCGCCATCACGAACCAAGACACCAGCTTGGACACCCTGCAGGAGCTGAACTCCACTGCCTACAACGCCATCCTTGAGGACATGAAAACCGCCATGAAGGACTCAACGAAGTTCTTGGGCAACAGCTTGGCCATCGTGACAAGGATCCTGTGGCTGCTATCGAAGTTCAACAGTCCCATGCACCGGCGACTACTGCGGTTCCCGAAGTGGAAACCTCTGGTTCTATAA 479 0.5574 LVAVIIAAIIGTIVHNCRSSNDSFAPSTQLKLKATASVQKAIDVCGTVLSDVVPNFNDLVSELGGGAKLLLATKINDIETWLSTAITNQDTSLDTLQELNSTAYNAILEDMKTAMKDSTKFLGNSLAIVTRILWLLSKFNSPMHRRLLRFPKWKPLVL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1395 158 SMART PMEI_2 1 128 IPR006501 GO:0004857
Dod03g1395 158 PANTHER PECTINESTERASE 28 144 - -
Dod03g1395 158 Pfam Plant invertase/pectin methylesterase inhibitor 32 128 IPR006501 GO:0004857
Dod03g1395 158 PANTHER PECTINESTERASE 1-RELATED 28 144 - -
Dod03g1395 158 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 132 IPR035513 -
Dod03g1395 158 CDD PMEI-like_3 23 132 - -
Dod03g1395 158 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 132 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1395 Dod-Chr3 18004145 18005592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1395 38 146 Carbohydrate Esterase AT1G53840 41.739 8.69e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1395 - - gmx:100777128 131.724