Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1393 ATGGAGATGAGCTGCCAAACAAATGTTAATAGTGGTAATATTCCTGTGTGTTCTACCTCGGGGAATATGTCTCACCTGGACCAGTGTTTCAGTGGGTATGTGCAACAGCCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAACATGGGCAAATGTGTGGTCCATATATTCAGGAGCAGTTATATGAGGGCTTAACTACTGGTTTCTTGCCATTTGAGCTTCCTGTATATCCTGTGATTAATGGCACAATAATGAACCCTGTACCATTGAATTATTTTAAGCAGTTTCCTGATCATGTTTCGACTGGGTTTGCATATTTGAGTTTGGGTATCTCAGGCTCAAGGATGCCTACAAATTGCCCGTCCTCTTCTTTGGGTATGGGAGTGTATGGTCAAAGTAGATCTTTTGAGAATGCTGCTGCTCTGGCTGTTGACCCTGATTCACAGTCTGTTTCGCATTCTCGTGGCAATTACTGCATTAATGAATCCAATCGCCCTTGTTCAAACTCAGAGGCATTTAACAGCGTAATATCTTCTCAGATGTTTGGTGAAGAATGTTGTTGGCTTTATGAGGATGAAAGGGGCATGAAACATGGTCCGCATTCTATTTCAAAACTGATTTCTTGGCACCGTCATGGATATCTTCAAGATTCATCAGTGATCTCTCATTCTGGCAATAAGTGTGGCCCCTTTGTGCTACTGGCTGCTGTAAATGCAATGAAAGGAGATACATCTGGAGCCATTTGTAGATCAGGTTCCAAAAGCAATGAGCTTGGTGGTATGGTAAACTTAATTTGTGAAATATCTGAGGACATATCTTCCCAATTGCACTTGGGTGTCATGAAAGCTGCCCGCAGAGTTGTGCTAGATGGGGTTATAAGCGATATTATTGCAGAATTTTTTACTGAAAAGAAACACAGGAGGCGGAAGCTTAAATCAACTAATCAGGCTTCTGGGACTTGCATTGCTGACACGAAAAGGTCCAAGGTTGCTGTGGAGACGAGTAAAGATACTGCCATCCCGAGTGAGCCTGCATCTTCCCATATTTCAGATGATCAGACTTGTCATGAAATTTCCAGACCTTCTTCAACAAGCATTAAATCAGTTGGAAGTGTTGAAAACTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTGTTGATTATTGCATGCAAGTCATGTGGAATGCTGTGTTTTTTGACACTATAGTGGAGTACTTATGTTCTTGGAGGAATAAGAAGCTTTGGTCTCCTCCAAATCCTCAAATATCTATTAATGGCTGTAGAGGTTATGTTGAAAAGATTAAATCAGAAGCTTTGCTTCTTAGGACAGGTTCCTCTGCATACCCTGCGGATGGCCGTGATCAGTTTGAAGTGTTTCCAACAGAGAGAGATTCTCATTCTCGGTTATCTTCTTTGTCTTCTAGTGGCCCAAAGGATGGAAACGTACTAGAGGGTCAAAGAGTTTTGTGCACTTATCATAAATCCAAAGATATGACACACATTCTTGAAAGTGTGGAAGATGAGCTTCATTTCTCTTCAAAGTTGTCTTTAGCTGAATACATTCGAAAGACTGTTGAAAGGGAAGTGAACAAAATAACTCATTCCCCAGATGAAGACAAATTGAGTGAGGTTGCTGTTAGTGACTGTGTTTTTTCAGAGATACTTACTGGTGAAACTTCTGTGAAGGAAATTCTGAATGACAAGTTGATGACTACTGTAAAGGCAGGAGATTCAGTTTGCGAGTCTTCATTTGAAAACCATATGTCTAATGTATTCTCCAATGCATTTAAGGAGTTGCATGGAGATGTAGTTGATGAAGAGGAAATTGGAGACCTTCCACCTGGATTTGAAGAGAACTCACACCCAATTTTCTCACAGTGCAGTTCTAACTTTCGACCTTCAAGGTTAGTTGAATGTAATCCCAAGATTACAGAGTATGTTGCTACTGCACTGTGCCGACAGAAGTTGCATGATGAAGTCTTGAAAGAGTGGAAGTCTTCACTTCTTGATTCTGCGTTTAAGCAACTTTTTATGTCATCATATTCCAAAAAGAAACATAAGACTCACTCTGATGGCCATGAGAAAGGGAGAACATTCAATGCTAGCAAGGAACATTTGAATTATGCTACTTCTGGACATGGAAGAATGAAGGAAGGAGCAAAACATTCTTCTGGAGTTCCTCTAGTGAACGGAAAGTATACATATCACCGCAAGAAATTGCCACGGAAAGAGTTGCATTCCTCTCAATCTGTATCTGTAGATGATTCTGGGCCAGGGAAGCAGCCTGTGGCTAAGTTAAGGAAAAATGTTTCTGGAGATTTGGATGAGATTGCAAAAGTTAAAAGAGCTGCTGTTAAGCGTGGAAAGACTAGGGTTATTAAAGGGAAGAAGGATAGACCTACTAAGGGCAGTTCTTCTCCTGTCAATGGCAATGGTAGCTTGAATAGTGATCAATCATCCTTGAAGAAGAAAACTAGTTCGAAAGCCTTGAAGTTTTCACATACTGTTGAAAATGATGTTGGGGATGTTGTAAAATCCAATGGAAAGAGGCTTTCAACATCAACAGATAATAGTGCTGGCATGAAGAAGGTGGTTAAAAGTAATGGCTGTGATGGCACTGTTAAAGGGAAGACTGCTGGTCATTGCTCCAGAGAAAGACGAAATGCAACAAATAAAATGTTAAAATCAAAAAGGAAACATCAGACAGATGATATGCCATCCTTACATCCTGCTAAGGTTTTGAAAATTTCGAATGATGGTGGAAAGCTAGGAGCAAGCAAACAGGCTACTGTTGCAAAGAGGACTTCTGCCAAATTCAAGCCAATGAATTTATGTCCTAGATCGGATGGATGTGCTAGAACTTCAATTGATGGGTGGGAATGGCATAAATGGTCTCATAGTGCCAGTCCTGCGTATAGAGCACATGTCAGAGGTCTTGCCTATGTACAAAACAAGCCCATAGATTCTGATAATAATTTATCTCAGCTGTCAAATAATAAGGGTATTTCTGCAAGAACAAATAGGGTAAAATTGCGTAACCTTCTTGCTGCTGTGGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTAAAGGCAAGGAAAAAGCGTTTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCCATGGAGCCAATAGAGGCAGAAGAGTTTGTGACTGAATATGTTGGGGAACTAATTCGTCCTCGGATATCTGATATACGTGAACATCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCAACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCCAACTGCTATACAAAGGTTATTTCTTTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGGCACATTGCTACTGGTGAAGAAATTACATATAATTATAAGTTCCCCTTGGAGGAGAAGAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCAATGAATTAG 3525 0.4045 MEMSCQTNVNSGNIPVCSTSGNMSHLDQCFSGYVQQPAFVSGWMYVNEHGQMCGPYIQEQLYEGLTTGFLPFELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLSLGISGSRMPTNCPSSSLGMGVYGQSRSFENAAALAVDPDSQSVSHSRGNYCINESNRPCSNSEAFNSVISSQMFGEECCWLYEDERGMKHGPHSISKLISWHRHGYLQDSSVISHSGNKCGPFVLLAAVNAMKGDTSGAICRSGSKSNELGGMVNLICEISEDISSQLHLGVMKAARRVVLDGVISDIIAEFFTEKKHRRRKLKSTNQASGTCIADTKRSKVAVETSKDTAIPSEPASSHISDDQTCHEISRPSSTSIKSVGSVENFWWSYAVVRKVLVDYCMQVMWNAVFFDTIVEYLCSWRNKKLWSPPNPQISINGCRGYVEKIKSEALLLRTGSSAYPADGRDQFEVFPTERDSHSRLSSLSSSGPKDGNVLEGQRVLCTYHKSKDMTHILESVEDELHFSSKLSLAEYIRKTVEREVNKITHSPDEDKLSEVAVSDCVFSEILTGETSVKEILNDKLMTTVKAGDSVCESSFENHMSNVFSNAFKELHGDVVDEEEIGDLPPGFEENSHPIFSQCSSNFRPSRLVECNPKITEYVATALCRQKLHDEVLKEWKSSLLDSAFKQLFMSSYSKKKHKTHSDGHEKGRTFNASKEHLNYATSGHGRMKEGAKHSSGVPLVNGKYTYHRKKLPRKELHSSQSVSVDDSGPGKQPVAKLRKNVSGDLDEIAKVKRAAVKRGKTRVIKGKKDRPTKGSSSPVNGNGSLNSDQSSLKKKTSSKALKFSHTVENDVGDVVKSNGKRLSTSTDNSAGMKKVVKSNGCDGTVKGKTAGHCSRERRNATNKMLKSKRKHQTDDMPSLHPAKVLKISNDGGKLGASKQATVAKRTSAKFKPMNLCPRSDGCARTSIDGWEWHKWSHSASPAYRAHVRGLAYVQNKPIDSDNNLSQLSNNKGISARTNRVKLRNLLAAVEGADLLKVPQLKARKKRLRFQRSKIHDWGLVAMEPIEAEEFVTEYVGELIRPRISDIREHQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISFEGQKKIFIYAKRHIATGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1393 1174 MobiDBLite consensus disorder prediction 336 361 - -
Dod03g1393 1174 MobiDBLite consensus disorder prediction 339 361 - -
Dod03g1393 1174 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1174 - -
Dod03g1393 1174 SUPERFAMILY GYF domain 180 239 IPR035445 -
Dod03g1393 1174 ProSiteProfiles Post-SET domain profile. 1158 1174 IPR003616 -
Dod03g1393 1174 SMART set_7 1035 1158 IPR001214 GO:0005515
Dod03g1393 1174 Gene3D - 175 252 IPR035445 -
Dod03g1393 1174 ProSiteProfiles SET domain profile. 1035 1152 IPR001214 GO:0005515
Dod03g1393 1174 Pfam SET domain 1047 1151 IPR001214 GO:0005515
Dod03g1393 1174 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1174 IPR044570 GO:0042800|GO:0051568
Dod03g1393 1174 MobiDBLite consensus disorder prediction 803 827 - -
Dod03g1393 1174 MobiDBLite consensus disorder prediction 712 769 - -
Dod03g1393 1174 ProSiteProfiles GYF domain profile. 185 235 IPR003169 GO:0005515
Dod03g1393 1174 CDD SET_SETD1 1023 1170 - -
Dod03g1393 1174 SUPERFAMILY SET domain 1031 1171 IPR046341 -
Dod03g1393 1174 SMART PostSET_3 1158 1174 IPR003616 -
Dod03g1393 1174 MobiDBLite consensus disorder prediction 787 829 - -
Dod03g1393 1174 Gene3D SET domain 1005 1174 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1393 Dod-Chr3 17954670 17977807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1393 1034 1174 C2H2 Transcription Factor Family AT2G23740 34.969 1.18e-17 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod03g1393 SET 5.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1393 - - aip:107636228 1716.82