Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1392 ATGGTGAAGTTCTTGAAGCCAAACAAGGCAGTTATCGTGCTGCAGGGCCGTTACGCCGGCAAGAAGGCCGTCATCGTGCGCACCTTCGACGACGGCACGCGCGACCGCCCTTACGGCCACTGCCTCGTCGCCGGGATCAAGAAATACCCTTCCAAGGTCATCAAGAAGGACTCCGCCAAGAAGACGGCCAAGAAGTCGCGCGTGAAGGCCTTCGTGAAGCTCGTGAACTACCAGCACCTGATGCCCACGCGCTACACGCTTGACGTGGATCTCAAAGACGTCGTGGCTCCGGACGCGCTTCAGTCCAAGGACAAGAAGGTAACTGCGCTCAAGGAGACCAAGAAGAGGCTCGAGGAGAGGTTCAAGACCGAGCCATGTAACCCCCTCCCTTTGACAAAAGGGTGTTTTCATAGCCGTTTCTCCTAG 426 0.5728 MVKFLKPNKAVIVLQGRYAGKKAVIVRTFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVAPDALQSKDKKVTALKETKKRLEERFKTEPCNPLPLTKGCFHSRFS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1392 141 Pfam Ribosomal L27e protein family 52 124 IPR001141 GO:0003735|GO:0005840|GO:0006412
Dod03g1392 141 Gene3D - 1 129 IPR038655 -
Dod03g1392 141 PANTHER 60S RIBOSOMAL PROTEIN L27 1 124 IPR001141 GO:0003735|GO:0005840|GO:0006412
Dod03g1392 141 Coils Coil 100 120 - -
Dod03g1392 141 Pfam KOW motif 7 36 IPR005824 -
Dod03g1392 141 SMART kow_9 4 31 IPR005824 -
Dod03g1392 141 CDD KOW_RPL27 6 88 IPR041991 -
Dod03g1392 141 PANTHER 60S RIBOSOMAL PROTEIN L27 1 124 - -
Dod03g1392 141 SUPERFAMILY Translation proteins SH3-like domain 2 111 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1392 Dod-Chr3 17950206 17955433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1392 1 123 Cytoplasmic Ribosomal Protein Gene Family AT4G15000 85.366 5.71e-74 215