Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1391 ATGGCGCCAGTCAATAGAGACCTGCAGCTCACTTCCCTCGCCGGCGCCGGCAACGACTCCGACGACCTCGAGGAGGTGCGGCTTCTGGACTCCTACGACTCCAGAGGCGGCATCGGCGCGGGAATCGGAGGCGGAATGAGGCGGATTCAGGTGAGGGTCACCGGAATGACCTGCGCCGCTTGCTCCACCTCCGTTGAATCCGCACTCCACGCCGTCGACGGCGTCATCACCGCCTCCGTCGCCCTCCTCCAGAACAAAGCCAACGTCGTTTTCAACCCAGCTCTGGTCAAGGACGAAGATATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGAAATATTACCTGAACCCAACACACTTGGAAAGACGCCAGATGGAACCCTGGTGGGACAGTTCACAATTGGGGGCATGACATGTGCAGCCTGTGTAAATTCTGTTGAAGGTATTTTGAGAAACCTTCCAGGGGTCAAAAGGGCTGTAGTAGCTTTGGCCACTTCATTAGGTGAAGTTGAATATGATCCGAGCGAAATTGGTAAAGATGATATAGTCAATGCAATTGAAGATGCTGGTTTCGAAGCTTCATTTGTACAGAGCAGTGAACAGGATAAAATAATTTTAGAGGTGGTTGGTGTGTATAGTCTGATTGATGCACAAGTTTTAGAAGGCATCATTAGCAGCATCAAAGGAGTAAGGCAGTTTCGTTTTGATCAGATATCGGGTGAATTGGATGTTCTCTTTGATCCTGAAGTTCTCAGTTCTAGATCCCTGGTTGATGGGATCCAGGAGGGAAGCAATGGAAAGTTTAAGTTACGTGTTAGAAACCCGTACTCAAGGATGTCTTCTAAAGATGTTGAAGAGATCTCAACTATGTTTCGGCTCTTTATCTCCAGCCTGTTTCTAAGTATTCCTTTATTCTTCATCCGGGTAGTTTGTCCTCATATACCACTGATGTATTCTTTACTACTTCGGAGATGTGGGCCTTTCCTCATGGGTGATTGGTTGAAGTGGGCATTGGTGAGTATCATTCAATTTGTGATTGGGAAGCGCTTCTATATTGCAGCTGGCAGAGCTCTCAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTGTGGGAACTACTGCCTCTTATTTCTATTCTGTTTATGCTCTTTTATATGGCGCTATTACTGGATTTCGGTCTCCAACTTACTTTGAAACAAGTGCCATGCTCATAACATTTGTCTTGTTGGGCAAATATTTGGAAAGCCTTGCCAAGGGAAAGACATCTGATGCCATCAAGAAGTTAGTAGAACTTGCTCCTGCAACAGCTTTATTGGTCGTCAAAGATAAAGGTGGTAGATCTATTGAAGAAAAAGAAATTGATTCTTTGCTCATTCAACCTGGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGAATTGTTACCTGGGGATCAAGTTATGTAAATGAGAGCATGGTAACTGGTGAAGCTGAACCTGTTTTGAAGGAGGTGAATGCATCTGTCATTGGGGGTACAATAAATTTGCATGGTGTCCTTCATATTCAAGCTACTAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTAGTTGAGACAGCCCAGATGTCAAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAGTTGTTTCTTTGGCATTATTGACATTATTTGGCTGGTATATTGCTGGGTCTGTTGGAGCTTATCCAGAAGAATGGCTGCCAAAAAATGGAAATCACTTTGTTTTTGCCCTAATGTTTTCAATAGCTGTAGTGGTGATTGCTTGTCCCTGTGCACTTGGCTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGGGTTGGGGCCAATAATGGAGTGTTAATTAAAGGAGGAGATGCCTTAGAAAGGGCTCAAATGGTGAAATATGTGATATTTGATAAAACGGGTACTCTAACTCAGGGAAAAGCCACTGTTACTGCTGCCAAGGTATTCACTGGAATGGCACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCAAAAGCATTAGTAGAATATGCACGGCATTTTCATTTCTTCGATGACTCCTCTGCTTCTAATGGTACCCAAAATGATGCCAAGGGGTTGAAGTCTGGGTGGCTTTTTGATGTCTCAGATTTCTTCGCTGTTCCTGGAAGAGGTGTCCAATGCCTTATAGATGGAAAGCGTATTTTGGTTGGTAACAGGAAGCTGATGGAGGAAAGTGGCATAGATATTTCAGGAGAAGTGGAAAATGTTGTGGTAGATCTGGAAGAAAGTGCTAAGACAGGGATCCTGGTAGCATATGATGATATATTAATTGGAGTCTTAGGGGTTGCAGACCCACTGAAGAGAGAAGCCTCTGTAGTTATAGAAGGCCTCAAGAAAATGGGTGTCAGACCTGTTATGGTTACAGGAGATAACCAGAGAACTGCTCGCGCTGTTGCCAAGGAGGTTGGCATCCACGACGTTAGGGCAGAGGTTATGCCTGCTGGAAAGGCTGAAGTTGTTCGCTCGTTCCAAAAAGATGGAAGCATAGTTGCAATGGTGGGTGATGGTATCAATGACTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCAATTGGGGCTGGAACTGATATTGCAATGGAAGCTGCTGACTATGTGTTGATGAGAAACAACTTGGAAGATGTGATCACCGCCATCGATCTTTCCCGGAAGACCTTCTCCCGAATTCGGTTGAATTATGTATTTGCAATGGGGTATAATGTTGTGGCTATACCAGTTGCTGCTGGGGTTTTATATCCTTCACTGGGTATCAAGCTGCCTCCATGGGTTGCTGGTGCATGCATGGCTTTCTCTTCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTCGGAGATATAGAAGACCGAGGCTTACTACAATTCTTGAAATAATTGTAGAATAA 2997 0.4451 MAPVNRDLQLTSLAGAGNDSDDLEEVRLLDSYDSRGGIGAGIGGGMRRIQVRVTGMTCAACSTSVESALHAVDGVITASVALLQNKANVVFNPALVKDEDIKNAIEDAGFEAEILPEPNTLGKTPDGTLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSLGEVEYDPSEIGKDDIVNAIEDAGFEASFVQSSEQDKIILEVVGVYSLIDAQVLEGIISSIKGVRQFRFDQISGELDVLFDPEVLSSRSLVDGIQEGSNGKFKLRVRNPYSRMSSKDVEEISTMFRLFISSLFLSIPLFFIRVVCPHIPLMYSLLLRRCGPFLMGDWLKWALVSIIQFVIGKRFYIAAGRALRNGSTNMDVLVAVGTTASYFYSVYALLYGAITGFRSPTYFETSAMLITFVLLGKYLESLAKGKTSDAIKKLVELAPATALLVVKDKGGRSIEEKEIDSLLIQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGEAEPVLKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTLFGWYIAGSVGAYPEEWLPKNGNHFVFALMFSIAVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKATVTAAKVFTGMARGEFLKLVASAEASSEHPLAKALVEYARHFHFFDDSSASNGTQNDAKGLKSGWLFDVSDFFAVPGRGVQCLIDGKRILVGNRKLMEESGIDISGEVENVVVDLEESAKTGILVAYDDILIGVLGVADPLKREASVVIEGLKKMGVRPVMVTGDNQRTARAVAKEVGIHDVRAEVMPAGKAEVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAMEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMGYNVVAIPVAAGVLYPSLGIKLPPWVAGACMAFSSVSVVCSSLLLRRYRRPRLTTILEIIVE* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1391 998 Gene3D - 46 117 - -
Dod03g1391 998 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 753 953 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g1391 998 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 405 704 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g1391 998 ProSitePatterns Heavy-metal-associated domain. 53 83 IPR017969 GO:0046872
Dod03g1391 998 Gene3D - 420 542 - -
Dod03g1391 998 SUPERFAMILY HMA, heavy metal-associated domain 126 200 IPR036163 GO:0046872
Dod03g1391 998 PANTHER ATP7, ISOFORM B 7 991 - -
Dod03g1391 998 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 366 981 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1391 998 SUPERFAMILY Calcium ATPase, transduction domain A 452 538 IPR008250 -
Dod03g1391 998 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872
Dod03g1391 998 Pfam Heavy-metal-associated domain 133 193 IPR006121 GO:0046872
Dod03g1391 998 Gene3D - 131 196 - -
Dod03g1391 998 SUPERFAMILY HMA, heavy metal-associated domain 43 118 IPR036163 GO:0046872
Dod03g1391 998 Gene3D - 751 803 IPR023299 GO:0000166
Dod03g1391 998 Gene3D - 659 750 IPR023299 GO:0000166
Dod03g1391 998 SFLD Haloacid Dehalogenase 634 924 - -
Dod03g1391 998 ProSiteProfiles Heavy-metal-associated domain profile. 130 196 IPR006121 GO:0046872
Dod03g1391 998 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
Dod03g1391 998 SUPERFAMILY Calcium ATPase, transmembrane domain M 388 947 IPR023298 -
Dod03g1391 998 CDD HMA 50 113 IPR006121 GO:0046872
Dod03g1391 998 Pfam E1-E2 ATPase 435 631 - -
Dod03g1391 998 SFLD p-type atpase 634 924 IPR044492 -
Dod03g1391 998 Gene3D - 619 929 IPR023214 -
Dod03g1391 998 ProSitePatterns Heavy-metal-associated domain. 135 164 IPR017969 GO:0046872
Dod03g1391 998 PANTHER HEAVY METAL P-TYPE ATPASE 7 991 - -
Dod03g1391 998 SUPERFAMILY HAD-like 651 978 IPR036412 -
Dod03g1391 998 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Dod03g1391 998 Pfam haloacid dehalogenase-like hydrolase 648 886 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 797 808 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 819 829 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Dod03g1391 998 PRINTS P-type cation-transporting ATPase superfamily signature 895 907 - -
Dod03g1391 998 TIGRFAM TIGR00003: copper ion binding protein 49 112 IPR006122 GO:0005507
Dod03g1391 998 TIGRFAM TIGR00003: copper ion binding protein 132 194 IPR006122 GO:0005507
Dod03g1391 998 CDD P-type_ATPase_Cu-like 293 969 - -
Dod03g1391 998 CDD HMA 132 195 IPR006121 GO:0046872
Dod03g1391 998 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Dod03g1391 998 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Dod03g1391 998 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1391 Dod-Chr3 17928807 17935243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1391 1 998 Primary Pumps ATPases AT5G44790 75.372 0.0 1515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1391 K17686 - gmx:100804960 1662.12