Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1371 ATGGCTTCTTCTTTTCTTCTTCATCAGCCAACACACTGCTTCTTCTCCAACACGCACACCCAGTTCAAAGGCTTGCGCCACCATGGCTTCTTCTGGGGACCCCCTTGCTCATTTGCCTCTGAAAACAAAGCCAGACCCATCAAGGCTTCTGTTGATGCACCCCCATTCCCATTGTTTCAGCCTCTAGAAGTTGAAGAGGAGTCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAGGATAGGTTATGTCCGGAGCATGCGAGCTTATGGAATCGACTTTAAGGAAGGGCCAGATGGATTTGGTGTGTATGCTTCCAAAGATGTAGAACCTCTTCGCCGACCAAGGGTTGTAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAACTCCCGTGGATGTTTTTCCCTGATATAATTCCAATAGGTCATCCAATATTTGATATTATCAACTCGACAGATCCAGAGACAGATTGGGACTTGAGGTTAGCTTGTCTCCTTTTATTTTCATTTGATTGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCAAGTGCGGATGAGTGCACTAGCTTACTTCTAGCAACAGAGGAGGAGCTTTCGGAGCTGCAAGATCCCGATCTTGCTTCTACTATGAGAAACCAGCAACAACGAGCCTTAGAATTTTGGGAAAAGAACTGGCACAGTGCTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTGGGTATTGCACAATCACGAAGTATCAACATGCAACTGAGAATTGGTGCACTTACTCAAGACACAAATATGCTAGTTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCGAATTGTTTTTTGCACTGGCGTTTTAAGGACCGGATGCTTGAGGTGCTTATCAATGCTGGTCAGCAGATTAGAAAGGGAGATGAGATGACAATTGATTACATGAGCGGACAGAATGACATGCTAATGCAGAGATATGGATTTTCATCGCCTGTGAATCCTTGGGACGTGATCAAATTCTCAGGCAATGCACGTATTCATCTGGATTCCTTCTTGTCAGTCTTCAATATATCTGGCCTCCCTGAAGAGTATTACCATAATAGATGTTTATCAAACGCTGGCGATACTTTTGTTGATGGAGCAGTCATTGCTGCAGCGCGAACATTGCCAACATGGTCGGACAGGGATGTGCCTCCAATCCCTAGTATGGAAAGAAAGGCTGTCAAGGAGTTACAAGAAGAATGCCAACAGATGCTTGCAGAATATGCTACAACCTCTAAGCAAGACCAGAAATTGCTAGATTCCTCGCCAAACGCTCCGCACACACTTGAGACTGCGATAAAGTATAGATTGCACCGGAAATCATTTATTGGGAAAGTTATCCAAGCGTTGGAGATCTATCAAGAGAAAATACTTTTCTGA 1449 0.4431 MASSFLLHQPTHCFFSNTHTQFKGLRHHGFFWGPPCSFASENKARPIKASVDAPPFPLFQPLEVEEESSELEPADPDFYRIGYVRSMRAYGIDFKEGPDGFGVYASKDVEPLRRPRVVMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTDPETDWDLRLACLLLFSFDCEDNFWQLYGDFLPSADECTSLLLATEEELSELQDPDLASTMRNQQQRALEFWEKNWHSAAPLKIKRLARDPQRFMWAVGIAQSRSINMQLRIGALTQDTNMLVPYADMLNHSFEPNCFLHWRFKDRMLEVLINAGQQIRKGDEMTIDYMSGQNDMLMQRYGFSSPVNPWDVIKFSGNARIHLDSFLSVFNISGLPEEYYHNRCLSNAGDTFVDGAVIAAARTLPTWSDRDVPPIPSMERKAVKELQEECQQMLAEYATTSKQDQKLLDSSPNAPHTLETAIKYRLHRKSFIGKVIQALEIYQEKILF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1371 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 52 475 - -
Dod03g1371 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 475 IPR036464 -
Dod03g1371 482 Coils Coil 417 437 - -
Dod03g1371 482 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 52 475 - -
Dod03g1371 482 SUPERFAMILY SET domain 99 338 IPR046341 -
Dod03g1371 482 Pfam SET domain 100 323 IPR001214 GO:0005515
Dod03g1371 482 Pfam Rubisco LSMT substrate-binding 411 464 IPR015353 -
Dod03g1371 482 Gene3D - 369 480 IPR036464 -
Dod03g1371 482 Gene3D set domain protein methyltransferase, domain 1 84 337 - -
Dod03g1371 482 CDD SET_LSMT 91 337 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod03g1371 SET 4.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1371 - - cam:101505820 801.201