Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1370 ATGCAGACAAATTTTATGATGAGTGCTGGAGACAGTTCAAAAATGTATGAGCAGACAGGTTTCCTTGATCCCAACACAACGGCAGAAGGAGGTACAATCTCACAAAAGGACATATTTTCCCAAACACTGCCAGACCTATCATCACCACCACAAATGGTTGCTTCAGGCAGCAACCTCACAAATAGGAATGAGGTCTCTGTGGATGAGCTATCATATCACCACCACCACAATCCACCACACATACAAGATTTCTCCACCTTTAAAAATGGAGTATCTGCCACATCCATGGACATCACACACTCACAGCATCTTGATTTGAACATGAGGAATCCCTCATCCAACAACAATGGCCTTCCCTATGAGCAGTCCTCTTGGGACTCAACCATAATGCAAGATGTTGGTTTTGCTAATCACCAAGAACATCAACAACCACCACCCCATGATCAACAATTTCAGATAACTAATGAGGCACAAAATTGTAGCCAAAGCTACAATTCATCTTTCACACTAGACCCTTCTTACCCTTCACCAAATATCCTGCTCCATCTCCACCAGCCCAGAATATCCACGTCCTCATCTTTCTCCACCAACCCTTCCCTTTGCATCACAAACCCAATTCAGAACACACCAAACTTTCAACATTCCATGGGGCTTCTTGGTGACCTTCCAATAGGGTCAAACAACACAAGTGCATCCTCAGTGATGAATGATTCTCTATTTCAATTGAATCTGCAGCCGCCACATGCTCAAGCCCTTGGAGAGATGTACCAGTCTCTCCCCCATGGCTACACCATGGGAACCAATTCCAGGAATGACTTCCTATGTGGTGGAGGGGATGAGATGATCCTGGAGGGAAATGGAGTTGTGTATCATGAAGGAGATGGGAACCAGCTTGAACTTGACATTGGAGTGCTGGAATTCAACACATTCTCAGATTCTTTTGTATGGGAAGGAAGAGAAGGAAAAGATCCCAAACAGCTTTCGACTGAGAAAAAAAGAAGAGAGCAAGTGAATGGCAAGTACCACATCTTGAGGAGTCTGATCCCAAACCCCACCAAGGTAGATAGAGCATCTGTGGTGGGAGATGCCATTGAGTACATAAGAGAGTTGATTAGGACAGTCAATGAGCTCAAGATATTGGTGGAGAAGAAAAGATGTGGGATGGAGAGGTGCAAGAGGCAGAAAACTGAGGTTGAAGCTGCAGAGAGCTGTAACATAAGGCCTTATGGTGACCCAGATAATGGGTGCATAAGAACCTCTTGGCTTAAGAGAAAATCCAAAGACAGCGAGGTTGATGTGCGGATAATTGATGATGAAGTTACAATCAAAGTGGTTCAGAAGAAGAAGATTAACTTTCTGCTTTTTGTCTCTAAGGTTCTGGATGAACTTCAGTTGGATCTTCACCATGCTGCAGGTGGGCATGTTGGAGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATTGAAGGTTCTTCAGTCTATGCAAGCGCCATAATCAACAGGGTGATTGAGGTTAAGGACATTCAGTATGCAGCAGCCGTTCCACACACTAGTAGCTATTAG 1563 0.4402 MQTNFMMSAGDSSKMYEQTGFLDPNTTAEGGTISQKDIFSQTLPDLSSPPQMVASGSNLTNRNEVSVDELSYHHHHNPPHIQDFSTFKNGVSATSMDITHSQHLDLNMRNPSSNNNGLPYEQSSWDSTIMQDVGFANHQEHQQPPPHDQQFQITNEAQNCSQSYNSSFTLDPSYPSPNILLHLHQPRISTSSSFSTNPSLCITNPIQNTPNFQHSMGLLGDLPIGSNNTSASSVMNDSLFQLNLQPPHAQALGEMYQSLPHGYTMGTNSRNDFLCGGGDEMILEGNGVVYHEGDGNQLELDIGVLEFNTFSDSFVWEGREGKDPKQLSTEKKRREQVNGKYHILRSLIPNPTKVDRASVVGDAIEYIRELIRTVNELKILVEKKRCGMERCKRQKTEVEAAESCNIRPYGDPDNGCIRTSWLKRKSKDSEVDVRIIDDEVTIKVVQKKKINFLLFVSKVLDELQLDLHHAAGGHVGEYCSFLFNSKIIEGSSVYASAIINRVIEVKDIQYAAAVPHTSSY* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1370 520 CDD bHLH_AtMYC1_like 329 398 IPR045896 -
Dod03g1370 520 Pfam Helix-loop-helix DNA-binding domain 329 370 IPR011598 GO:0046983
Dod03g1370 520 Gene3D - 319 385 IPR036638 GO:0046983
Dod03g1370 520 PANTHER TRANSCRIPTION FACTOR BHLH91 37 518 - -
Dod03g1370 520 PANTHER TRANSCRIPTION FACTOR BHLH91 37 518 IPR045895 GO:0006355|GO:0048658
Dod03g1370 520 SMART finulus 327 376 IPR011598 GO:0046983
Dod03g1370 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Dod03g1370 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 393 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1370 Dod-Chr3 17636508 17638799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1370 159 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 42.147 4.16e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod03g1370 HLH 3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1370 - - gmx:100782512 585.874