Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1361 ATGGATTCAGCAGTGAGAAACATAACGCTTTCTTCAATTGTGCTACTCTTGTGCCTAGTACTTTGCCATGGCAAGTTATTAGACGATGAAACAACTTTGAGGGTGCTTTTGGAGGTAAAATCATCTTTTGTAAAAGACCCAGAAAATGTTCTGGGTGATTGGTCAGAGAACGACACAGATTACTGTAGTTGGAGGGGGGTGTCATGTGGTGGTACTACTACTACATCATTGAACGAGTCAGTGCAAGTTGTTGGACTCAACCTGTCTGACTCATCACTCAGTGGGTCAATATCAGCCTCACTCGGTCTCTTGCAAAACCTGATCCACCTTGACCTCTCTTCTAACTACCTTGAGGGTCTCATTCCAACTTCACTCTCCAACCTCACTTCACTTGAATCGCTCTTTCTCTTCTCTAACCAACTCACGGGTCACATCCCCACCGATTTGGGCTCGCTGCTGAGTCTCCGAGTCATCCGACTCGGTGACAACGGACTCACTGGACCGATTCCCGCGTCGCTTGGGAATCTCGTTAACCTCGTTACCTTGGCCCTCGCCTCGTGCAAACTCACCGGGTCGATTCCACCAGAACTGGGTCGACTCACCGAGTTGCAGTACCTGAACGTGCAGTACAACGAGTTGACGGGTCTGATTCCTTCCGAGTTGGGGAACTGCTCGAGCCTCGTGGGCTTCGTGGCAGCAGGTAACCGGCTAAATGACTCGGTCCCGAGTGAACTGGGTCGACTCAGTAATCTCAACAGTCTCAACCTTGCAAACAACAGCTTAACGGGCGAGTTGCCGAGGCAACTCGGCGAGCTGAGTCAACTCGTTTACATGAATTTCATGGGGAACCAACTCGAAGGTCGCATCCCAACGTCATTGGGTCAATTGGGTAAGCTTCAAACTCTTGACTTGTCAATGAACAAGCTCAGTGGAGGTGTTCCAGCTGAGTTGGGGAACATGGGTATGCTAAAGTACATGGTTCTATCTAGGAACCGACTTTATGGTACAATTCCTAGGAACATGTGTTCCAATGCAACGAGTTTGGAGTATTTGGAAATGTCAGATTGTGCACTTTATGGTGAGATTCCAAATGGATTGGGTCAATGCCAATCACTCAATTATATTGATTTGACCAACAATTCTCTCAACGGGTCAATACCTATTGAGTTTTATGGGTTGGCGAGGCTAACTACTTTACTCCTTAGCATCAACAACTTGGTTGGTTCAATCTCTCCCTTCATAGGGAACCTCACCAACATGCAAACATTGATATTGTATCAAAACGGCTTTCATGGGGCTTTGCCTAGAGAGATTGGGATGCTTGGGAAGCTTGAAACTTTGTATCTTTATGATAATCAGTTGTCAGGGAAGATACCTTTGGAGATTGGTAACTGTTCAAGCTTGCAAATGATTGATTTTTATGGGAACCACTTCAGTGGGGGGATTCCAATCACTATTGGAAGGCTCAAAGAGTTGCAATGGCTTCATCTTAGGCAGAATGAGCTTGTTGGGGAGATTCCAGCCACACTTGGTAATTGCCACAAGCTGAATCTTTTGGATTTGGCAGATAATCAGCTATCAGGTGGCATTCCTGCAACATTTGGATTCCTCACAGCCTTGGATCAGCTCATACTATACAACAATTCTCTTGAAGGCAATCTTCCTCACCTATTGGTGAATGTTGCAAACTTGACTAGAGTGAACCTTTCCAAGAACCGGCTGAATGGTAGCTTGGCTCCATTGTGTAGCTCTCGGTCCTTTCTTTCATTTGATGTTTCAGATAATGCATTTGATGGCGAAATTCCCTCTCAATTGGGAAATTCACACTCCCTTGATAGGCTAAGATTGGGTGACAATAAGTTTGCTGGTGAAATTCCTAGGACATTGGGGAAGATAACTGAGTTGTCATTGTTAGACCTCTCAGGAAATTCACTCACTGGACCAATTCCAGATGAGCTTTCTTTGTGCAATAAACTGTCCCACATTGATTTGAACAACAATCTTTTATCTGGACGCATACCACCATGGCTTGGAAGTTTGCCTCAGTTGGGGGAGCTTAAGCTCTCATTCAATCAATTTTCAGGGTCACTTCCAATAGGCCTTTTCAAATGTTCCAAGTTGCTAGTACTCTCTCTTGATGGAAATTCTCTCAATGGAAGTCTCTCAGGTGATATTGGCAATCTTACTTCCCTTAATGTCCTTAGACTTGATCACAATAATTTCTCTGGACCAATCCCTCCTGCAATGGGCAAGTTGAACAAGCTTTATGAGCTCAAGCTATCAAGAAATGGCTTTAGTGGTGAGATCCCATTTGAAACTGGAAATCTTCAAAATCTTCAAAGCAGTTTGAACCTCAGTTACAATAATCTCTCTGGTAACATCCCACCTTCAATTGGGACGCTGTCGAAATTGGAAGCACTTGATCTTTCCCACAATCAACTGACTGGAGAAGTCCCTGCAGTGGTTGGTGAAATGAAGAGTTTGGAAAAATTTGATATCTCTTACAATAACTTTCAGGGTGAATTGGACAAGCAGTTCTCCCACTGGCCAGTCGAAGCTTTTGCAGGGAACCTGCACCTTTGTGGAGCCTCGCTCGGGCACTGCAAGAGTGGAGATGCTAAGCTGTCGCGCTCAAGTGAGACATCAGTAGTTATAATCTCTGCCTTTTCAACCTTAGCTGTAATTGTGCTGCTAGTACTTGCAGTGAGCATGTTCCTGAAAAACAAGCAAGGATTTTTCAGGAAAATTGGTGAAGTGAATTGTGTTTACTCATCCTCTTCCTCACAAGGAAAGAGACGATCGCCGTTCCCACTAAATGCCGGTGGGAAGCGAGACTTTAGGTGGGAAGACATCATGGATGCCACAAACAATCTAAGTGATGAATTCATAATTGGTTCTGGGGGTTCCGGGGCAGTCTACAGAGCTGAACTGGCCACTGGAGAGATTGTTGCTGTCAAGAAGATTTCGTGGAAAGACGATTGCCTGTTAAACAAGAGCTTTATGAGAGAGGTCAAGACGTTGGGGAGGATTAGGCATAGACATCTGGTAAAACTGATTGGTTGTTGCAGCAATAGAAACAAAGGAACAGGCTGGAATCTGTTGATATATGAGTACATGGAGAATGGGAGTGTATGGGATTGGCTTCATGGGAAAATACCTTTGAAGGCAAGCAAAGCAAAGGGAAGCCTTGATTGGGATGCAAGGTTCAAAATTGCTGTGGGGTTAGCTCAAGGAGTGGAGTACCTTCACCATGACTGTGTGCCAAAGATCATTCACAGGGACATCAAAACCAGCAACATATTACTAGATTCCAGAATGGATGCACACTTGGGAGATTTTGGGCTGGCAAAAGCCCTCATTGATAATAATTATGACTCCAATACTGAGTCTAATTCTTGTTTTGCTGGGTCTTATGGTTACATAGCCCCAGAGTATGCGTACACACTGAAGGCAACAGAAAAGAGTGATGTTTACAGCGTGGGGATTGTGCTGATGGAACTTGTTAGTGGTAGAATGCCAACAGATGAAGCATTCAGAGCAGACATGAACATGGTGAGATGGGTGGAGATGCACATTGACATGCAAGGCGGTGGGGGTGAGGAATTGATAGATCCTGAGCTGAGGCCTCTTTTACCTTTTGAGGAGTTTGCAGCATTCCAAGTACTTGAGATAGCCATGCAGTGCACAAAAACTGCACCACAAGAGAGGCCGTCATCACGGCAAGTTTGTGATCTTCTCATGCATGTGTCAAAAAACAAAAGGGTGAACTTTGAGAAGATGAACTTGGGTCAACACTGGTGA 3801 0.4488 MDSAVRNITLSSIVLLLCLVLCHGKLLDDETTLRVLLEVKSSFVKDPENVLGDWSENDTDYCSWRGVSCGGTTTTSLNESVQVVGLNLSDSSLSGSISASLGLLQNLIHLDLSSNYLEGLIPTSLSNLTSLESLFLFSNQLTGHIPTDLGSLLSLRVIRLGDNGLTGPIPASLGNLVNLVTLALASCKLTGSIPPELGRLTELQYLNVQYNELTGLIPSELGNCSSLVGFVAAGNRLNDSVPSELGRLSNLNSLNLANNSLTGELPRQLGELSQLVYMNFMGNQLEGRIPTSLGQLGKLQTLDLSMNKLSGGVPAELGNMGMLKYMVLSRNRLYGTIPRNMCSNATSLEYLEMSDCALYGEIPNGLGQCQSLNYIDLTNNSLNGSIPIEFYGLARLTTLLLSINNLVGSISPFIGNLTNMQTLILYQNGFHGALPREIGMLGKLETLYLYDNQLSGKIPLEIGNCSSLQMIDFYGNHFSGGIPITIGRLKELQWLHLRQNELVGEIPATLGNCHKLNLLDLADNQLSGGIPATFGFLTALDQLILYNNSLEGNLPHLLVNVANLTRVNLSKNRLNGSLAPLCSSRSFLSFDVSDNAFDGEIPSQLGNSHSLDRLRLGDNKFAGEIPRTLGKITELSLLDLSGNSLTGPIPDELSLCNKLSHIDLNNNLLSGRIPPWLGSLPQLGELKLSFNQFSGSLPIGLFKCSKLLVLSLDGNSLNGSLSGDIGNLTSLNVLRLDHNNFSGPIPPAMGKLNKLYELKLSRNGFSGEIPFETGNLQNLQSSLNLSYNNLSGNIPPSIGTLSKLEALDLSHNQLTGEVPAVVGEMKSLEKFDISYNNFQGELDKQFSHWPVEAFAGNLHLCGASLGHCKSGDAKLSRSSETSVVIISAFSTLAVIVLLVLAVSMFLKNKQGFFRKIGEVNCVYSSSSSQGKRRSPFPLNAGGKRDFRWEDIMDATNNLSDEFIIGSGGSGAVYRAELATGEIVAVKKISWKDDCLLNKSFMREVKTLGRIRHRHLVKLIGCCSNRNKGTGWNLLIYEYMENGSVWDWLHGKIPLKASKAKGSLDWDARFKIAVGLAQGVEYLHHDCVPKIIHRDIKTSNILLDSRMDAHLGDFGLAKALIDNNYDSNTESNSCFAGSYGYIAPEYAYTLKATEKSDVYSVGIVLMELVSGRMPTDEAFRADMNMVRWVEMHIDMQGGGGEELIDPELRPLLPFEEFAAFQVLEIAMQCTKTAPQERPSSRQVCDLLMHVSKNKRVNFEKMNLGQHW* 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1361 1266 SUPERFAMILY Protein kinase-like (PK-like) 936 1247 IPR011009 -
Dod03g1361 1266 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 1261 - -
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 584 653 IPR032675 -
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 31 151 IPR032675 -
Dod03g1361 1266 ProSiteProfiles Protein kinase domain profile. 958 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1361 1266 Pfam Protein kinase domain 963 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 232 391 IPR032675 -
Dod03g1361 1266 SUPERFAMILY RNI-like 85 407 - -
Dod03g1361 1266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 152 231 IPR032675 -
Dod03g1361 1266 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 1261 - -
Dod03g1361 1266 SMART LRR_typ_2 104 127 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 296 319 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 200 223 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 489 513 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 393 417 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 632 656 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 801 825 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 680 704 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 728 752 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 128 152 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 248 272 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 320 344 IPR003591 -
Dod03g1361 1266 SMART LRR_typ_2 441 465 IPR003591 -
Dod03g1361 1266 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 746 868 IPR032675 -
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 654 745 IPR032675 -
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 392 481 IPR032675 -
Dod03g1361 1266 Gene3D Transferase(Phosphotransferase) domain 1 1039 1264 - -
Dod03g1361 1266 SMART serkin_6 958 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1361 1266 ProSitePatterns Protein kinases ATP-binding region signature. 964 987 IPR017441 GO:0005524
Dod03g1361 1266 Pfam Leucine rich repeat 86 141 IPR001611 GO:0005515
Dod03g1361 1266 Gene3D Ribonuclease Inhibitor 482 583 IPR032675 -
Dod03g1361 1266 Gene3D Phosphorylase Kinase; domain 1 921 1038 - -
Dod03g1361 1266 SUPERFAMILY L domain-like 638 861 - -
Dod03g1361 1266 PRINTS Leucine-rich repeat signature 635 648 - -
Dod03g1361 1266 PRINTS Leucine-rich repeat signature 801 814 - -
Dod03g1361 1266 SUPERFAMILY RNI-like 302 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1361 Dod-Chr3 17376965 17381740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1361 5 705 Receptor kinase-like Gene Family AT1G17750 36.709 5.58e-101 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g1361 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1361 - - gmx:100801889 1777.3