Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1343 ATGCTCACAAGCGACCCCAAAAGGGTCTTGCCAAAGTTCCAATTTTTAGCCTCCAAAGGTGCGTCACCGTCTGATATTGTCATGGTAGTTTCTAGGAACCCCATTTTCGCGAGTTCGAGCCTCAAGAACAACATAATCCCTACCTATGAATTGATTAGGGGCTTCTTCCAGTCTGATAAAGAAGCCCTTAGTTGCATATTAAATTGCCCCTATTTGTTCATGGGGGATCGCTTGGCACACAATTTGAAGTTGTTGCTTGATGAAGGAGTCACCGACTCCACCATTCGCCACATGTTTCGCACTAGGGCTCATGTGCTCTTAGCTTATGAATTGAGGAAGGCTGTGGATGAAGTAAAGGAATTGGGGTTTGATACTTCACAAGTGAAATTTGGTATAGCATTGATTGCCAAAAGGGCTGTTGCCAAATCCTCCTGGGATGCCAAAGTTGATGCCCTTAAGAGCTGGGGGTGGTCTGAAGAAGCCATAGTTGAAGCATTCAGGAGGCAGCCATTGTATATGTTAGCATCTAAGGATAAGATTAACAAGGTGATGAGACTTTGGGTGGATCAATTTGGTTGGAACCCTTTGACTCCTGTCAAGTTGCCAGAGATTTTTGGATATAGTTTGGAGAGAAGGATCATTCCAAGGGCTTTTGTCATCCAGTATTTGCTTGCAAGAGGTTTGAGAGACAAGAATGACAGCTTAAATACACCATTTAGTGTTTCTGAAAAGTCATTCCTCAAAAAGTTTGTGGAACGTTTTACGGAGGAAAGGTCTCAACTACTGAAGATATACCAGGAAAAAAAGAATGTTCAAGATCAAGATAACAGGGAATGA 837 0.4265 MLTSDPKRVLPKFQFLASKGASPSDIVMVVSRNPIFASSSLKNNIIPTYELIRGFFQSDKEALSCILNCPYLFMGDRLAHNLKLLLDEGVTDSTIRHMFRTRAHVLLAYELRKAVDEVKELGFDTSQVKFGIALIAKRAVAKSSWDAKVDALKSWGWSEEAIVEAFRRQPLYMLASKDKINKVMRLWVDQFGWNPLTPVKLPEIFGYSLERRIIPRAFVIQYLLARGLRDKNDSLNTPFSVSEKSFLKKFVERFTEERSQLLKIYQEKKNVQDQDNRE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1343 278 Gene3D Transcription termination factor 3, mitochondrial 82 264 IPR038538 -
Dod03g1343 278 Pfam mTERF 146 247 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 Pfam mTERF 6 128 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 SMART mt_12 27 58 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 SMART mt_12 195 229 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 SMART mt_12 63 91 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 PANTHER CGI-12 PROTEIN-RELATED 2 270 IPR003690 GO:0003690|GO:0006355
Dod03g1343 278 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1343 Dod-Chr3 17076567 17079078 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod03g1343 mTERF 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1343 K15032 - gmx:102666739 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2707 05 53210851 53213480 Dod03g1343 03 17076567 17079078 PCT