Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1332 ATGCTTGGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGCAGTATCCCTTGCAAGGCTGCCAATGGCTACAAAATCCTTCCTGATATCCCCAGAACAAGCAGCTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACAAACATATGCAATGGTGTTATTGGGGAAGAAATCCTTCCCAGTTTGGACTCTCCTAATTCATTTCGCAAGGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCTTCTCTCCATAGTTTGTCAAACCTAAGTTGCAGTCCATCCACACCGAGTGATATGCTTGAGTATGACACTTGTACATTGAGATCATCGAGTGCTCCTTCCAGAAGTGAAGGATTTCTTAATGCTACAGAAGTACAAGTCGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCCGACTTTCTGGCTGGTACCTTTTACGATACCATCGTATCTTATTTTAACATGTTATGTTTGGATTTAGAATCAGATTCCATCAAAGCTTCCAACAATTCTAGTCTTGAATGTTTCGGGAAGAGTTGTTCCCCTGCAAAGACAGAACCATCCTGTAAATCATTTTCACATGGGGTACTTGATAGCCTCCAACGCGCACTTCGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTCTCTGTTGGATCTTGCATCCTACTTGTGCTTCTTCATGGGAAAGATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTTTTGGCAACATGCGGTATGAATGACAGAATGAGTGGGAATGTGAGAATGAAAGCTATTCAGCTTACCGATAATCATACTGTTGACAATGAAGCTGAAAGAGCTCAGCTTCTTGTCAGTCACCCTGATGATCCCAAAGCCATTATAGCAGGGAAAGTGAAAGGAAAACTGAAGGTTACTCGCGCCTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTAAACGATGCATTGATGGGAATCCTTCGAGTGCGCGATCTTATAAGCCCACCATATGTTTCCACTCAACCATCACTAAACGTGCATAAAATCTCAAATTCCGATCAGTTCGTTATAGTTGCGAGTGATGGCTTATTTGACTTCTTCAGTAATGACGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGCAATCCATTTGGTGATCCAGCAAAGTTCCTTGTTGAGCAACTTGTAGCAAGAGCTGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCTGGGAGGAGGAGGAAGTACCATGATGACGTGACCGTAATTGTGATCATCCTTGGGATGAATCAACGGACTTCAAAGGCATCAACTTGCATTTAA 1473 0.4236 MLGPEGELKISFGYQCNSSIPCKAANGYKILPDIPRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPNSFRKVPSSPSLSKLDILSSSLHSLSNLSCSPSTPSDMLEYDTCTLRSSSAPSRSEGFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTFYDTIVSYFNMLCLDLESDSIKASNNSSLECFGKSCSPAKTEPSCKSFSHGVLDSLQRALRQVENDFLYMVEQEMEERPDLVSVGSCILLVLLHGKDLYTLNLGDSRAVLATCGMNDRMSGNVRMKAIQLTDNHTVDNEAERAQLLVSHPDDPKAIIAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYVSTQPSLNVHKISNSDQFVIVASDGLFDFFSNDEAVQLVESYILSNPFGDPAKFLVEQLVARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1332 490 PANTHER PROTEIN PHOSPHATASE 2C 2 199 IPR015655 GO:0004722|GO:0006470
Dod03g1332 490 CDD PP2Cc 146 477 IPR001932 -
Dod03g1332 490 SUPERFAMILY PP2C-like 146 478 IPR036457 -
Dod03g1332 490 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 489 - -
Dod03g1332 490 Gene3D - 106 486 IPR036457 -
Dod03g1332 490 PANTHER PROTEIN PHOSPHATASE 2C 213 489 IPR015655 GO:0004722|GO:0006470
Dod03g1332 490 ProSiteProfiles PPM-type phosphatase domain profile. 133 477 IPR001932 -
Dod03g1332 490 Pfam Protein phosphatase 2C 242 431 IPR001932 -
Dod03g1332 490 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 199 - -
Dod03g1332 490 SMART PP2C_4 120 475 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1332 Dod-Chr3 16941940 16946199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1332 4 490 PP2C-type Phosphatase Gene Family AT3G16560 65.392 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1332 - - gmx:102666789 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1332 03 16941940 16946199 Dod03g1332 03 16941940 16946199 ECH
Dod05g2692 05 53048383 53052470 Dod03g1332 03 16941940 16946199 PCT