Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1328 ATGTCTACTTCTTCTTCTTGGCTTACCTCCCCTTCATGTTCTCCTTTAGAAGTGGATTCATCTTCCCCTACTGCACGACTTGTAGGACAGTGGTTAAGGTTCATCTTCTTATCTCCATGCCCTCAGAGAGTTCTTCTTTCTGCTGTTGATCTCATCTTTTTGATCACCTTAGTAGCCTTTGCAGCACATAGGCTTTATTCTAGATTCAGCGCCAATGCCAACTCTAGTTCCACAATCACCAAACCTCTTCTGCAGGACAAGGACTCAGACTTCAAAGTTACCTTGTGGTTCAAACTACCCTTTTTGGTGACAGTGCTGTTGGCTGTGGCTTACACGGTTCTAAGCATCTTGGCTTTCACTGAAAGCAACTCTGCCTCATGGATACAGATAGAGGCACTGTTTCGGCTTGCACAAGCAATAACCAACATAGTGATAGTGATCCTAATGGTACACGAGAGGAAGTTCAAAGCTTTGAAGCACCCTTTGTCCCTAAGAATTTACTGGACAGCAAACTTTGTTGTTGCTTGCCTTTTTGCTGCTTCAGCCATTGTTCGCCTTGTGAGTGTTGGTGAAGGGAGGTTGGAGCCTAATTTGAGAGTAGACGATGTGTTCTCATTGGTCAATCTTGTGCTATCTTTGTTCCTTTTGGTAGTAGCAATGAAAGAGTCATCAGGGATTCATGTGATCAGAATATCTGATGTGGTTGAAGGCTCAAGAACCAATCAGTGGCTTTCCAATGATAGGACCATGAGCCCTTATGGTCATGCCTCTTTCTACTCCAAAACAGTGTGGCTTTGGATAAACCCTTTGCTCAATAGAGGGTACACAACACCCCTCAAGATGGAAGATGTGCCAACACTTCCTCTTGAATTCAGAGCTGAGAAGATGTCAGAGCTTTTCCAGGAAAAATGGCCAAAGCCTGAGGAAAACTGCAAGCACCCAGTTGGAATCACTTTGCTCAGGTGCTTCTGGAAACACATAGCCTTCACTGGCTTCCTTGCAGTTATTAGGCTTGGAGTTATGTATATTGGTCCAGTACTTATTCAAAGCTTTGTTGACTTCACCTCAATGGCTAACCCCTCTCCCTATGAAGGTCTTGGTCTGATTCTGATCCTGCTTGTTGCAAAAACAGTTGAAGTCCTCAGTGTGCACCAATTCAACTTCCACTCTCAGAAACTAGGCATGATGATTCGTTCCAGCATCATCACTTCTGTGTACAAGAAGGGCTTGAGGTTGTCAAGCTCTTCAAGGCAGGCTCATGGTACTGGCCAGATTGTGAACCACATGGCTGTTGATGCTCAGCAGCTATCAGATTTGATGCTGCAGCTGCACCCTATATGGTTGATGCCATTGCAGGTTGCTGTAGCTTTGGCCCTTATATATTACTATGTTGGCTTATCTGTAGTTGCAGCCCTGCTTGGAACCATTGTGCTGTTTATCTTCACTGTTTTTCGGTCCAAGAGGAGCAATAGCTTCCAGTTCCGGATCATGATGAGCCGTGACTTGAGGATGAAGGCAACCAATGAGCTTCTTAATAACATGCGTGTGATCAAGTTCCAAGCATGGGAGGACTATTTTGGAAACAAAATTCAACAGTTTCGCGAAGCTGAGCATGGTTGGATTGGCAAGTTCTTGTACTATTTTGCTGTTAACATGGGAGTTCTGTCCTCTGCTCCACTCTTGATAACCGTTCTTACCTTCGGAACTGCGACACTTATTGGCATTCCTCTAAATGCTGGCACTGTGTTCACAATAACTTCAGTGATCAAGATCCTGCAGGAGCCGGTGAGGACCTTCCCGCAAGCTCTTATCTTGATATCTCAGGCTTTAATCTCTCTGGGGAGGTTGGATGAGTTCATGATGAGTAAGGAGAGGGATGAGAATGCAATTCAGATAGAGGACAATCGTGATGGTGATATAGCCGTGGAGATAAAAGATGCCAAATTCTCTTGGGATGATGCAGATGGGAATGAAGCCCTGAAAGTTGAAGAGCTGGTAATTAGGAAAGGGGAGCATGCTACTGTTGTTGGAACTGTTGGGTCAGGCAAGTCTTCATTGTTGGCTTCTGTGCTGGGAGAAATGTTCAAGATCTCCGGAGAGGTCAGAGTTTGTGGGACAGTTGCCTATGTAGCACAAACATCATGGATTCAGAATGCAACCATCCAAGAAAATATATTGTTTGGTTTACCAATGAACAATGAGAAATACAAGGAAGTTGTAAGAGTGTGCTGCCTGGAAAAGGATCTTGAAATGATGGAATTCGGGGACCAGACTGAGATCGGAGAACGGGGCATTAACCTCAGTGGTGGCCAGAAGCAACGTGTGCAACTTGCTAGAGCTGTATACCAGGATTGTGACATCTATCTCCTTGATGATATATTCAGTGCTGTTGATGCCCAAACAGGATCATTTATCTTCAAGGAATGTATCAAGGGAGCTCTCAAACATAAGAGCATTTTACTTGTAACTCACCAAGTTGACTTCTTGCACGATGTTGACTCTATAATGGTGATGCGAGATGGGAGAATCGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCCGGCCTGGATTTTGGTGCACTTGTGGCTGCTCATGAAAGTGCTATGGAGGCTACAGAAACTGGAGATGATGCTGGTGATGATCCAGGTCAGTCTCCAAAGTTGGCTCGTGTCCCTTCAAAAGAAAAGGAAAGCGCAGGTGAAAATCAACCTGAAGATCAATCTAATTCTGATAAGGGCTCGTCAAAGCTCATTGAAGATGAGGAGAGGGAAACCGGCCGCGTCAATCTTCAAGTGTACAAACATTATTTCACTGAAGCATTTGGGTGGTGGGGAGTAGCACTGATGCTGGCAATGTCTCTAGCATGGATTGTATCCTTTTTGGCTGGTGACTACTGGCTAGCATTTGCAACTTCACAAACTTCTGGCATTTCTTCTGCTACGTTCATCACTTTCTATGCTATCATAGCAGCTACTGCATGTGCAGTGGTGATGGTCAGGTCAGTCTTATTTACATATTGGGGTCTCAGGACATCTCAAAGCTTCTTCATAGGAATGCTTCATAGCATCCTGCATGCACCAATGTCATTCTTTGACACCACTCCTTCTGGAAGAATTTTGAGTCGTGTATCTACTGATCTACTTTGGGTTGATATATCGATTCCAATGTTAATAAACTTCGCAATGGTGGCATACTTCTCAGTGGTCAGCATCCTCATCGTCACGTGCCAAAATGCTTGGGAAACAGTCTTCCTCTTAATTCCACTGGTGTGGCTTAATAACTGGTATAGGAAATATTACATTGCATCTTCTCGGGAATTGACTCGCCTTGATTCTATCACGAAAGCTCCGGTGATTCATCACTTCTCAGAGACCATTTCTGGTGTTATGACAATCCGTGGCTTCAGAAAGCAGGGCGCATTCAGCCAGGAAAATACTGACAGGGTCAATGCAAGTCTGAGAATGGATTTCCACAACAATGGAGCCAACGAATGGCTTGGCTTCCGATTGGACTTTATGGGAGTGGTTTTCCTTTGCATTGCCACTGTTTTTATGATCTTTCTGCCTAGTGCTATTATTAAGCCAGAATATGTTGGCTTGTCTCTATCCTATGGCCTGGCTCTCAGTGGTCTCTTGTCAGTAACCATAACTATGACTTGTTCTGTTGAGAACAAAATGGTTTCAATTGAGAGGATAAAGCAGTTTACCAACCTTCCATCAGAAGCTGCATGGAAAATCCCTGATAGGACTCCTCCTCAGAATTGGCCCAGTCGTGGCACCATCGAGTTGAATAACTTGCAGGTTCGGTATCGGCCAAACACTCCTCTAGTTCTCAAGGGTTTATCTCTCACAATTAAAGGAGGAGAGAAGATTGGAGTTGTTGGCCGTACAGGTAGTGGGAAATCAACCCTCATCCAGGTACTATTCAGGTTGATTGAGCCTTCAGCTGGGAAGATAATTGTTGATGGGATCAACATTAGTACTGTGGGGCTTCATGATCTGAGGTCTAGGTTCGGAATCATACCACAAGAGCCTGTCCTCTTTCAAGGAACTGTAAGGAGCAACATTGACCCCCTTGGATTGTATTCAGAGGAAGAAATTTGGAAGAGCCTCGAGCGCTGCCAGCTGAAAGATGCAGTGGCTGCTAAGCCTGAGAAGCTAGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAGCTACTTTGCTTGGGAAGGATCATGCTGAAACGCAGCAAAATACTGTTCATGGATGAGGCAACAGCATCTGTTGATTCACAAACAGATGCTGTGATACAGAAGATCATCCGGGAGGACTTTGCAGACCGTACAATCATCAGTATTGCTCACAGAATACCAACAGTCATGGATTGTGACAGGGTTTTGGTCATCGATGCAGGTTATGCAAAGGAATATGATAAACCATCACGTTTGCTAGAAAGGCCTACACTTTTTGCGGCATTGGTTAAGGAGTACTCCAACAGATCATCATAA 4509 0.4462 MSTSSSWLTSPSCSPLEVDSSSPTARLVGQWLRFIFLSPCPQRVLLSAVDLIFLITLVAFAAHRLYSRFSANANSSSTITKPLLQDKDSDFKVTLWFKLPFLVTVLLAVAYTVLSILAFTESNSASWIQIEALFRLAQAITNIVIVILMVHERKFKALKHPLSLRIYWTANFVVACLFAASAIVRLVSVGEGRLEPNLRVDDVFSLVNLVLSLFLLVVAMKESSGIHVIRISDVVEGSRTNQWLSNDRTMSPYGHASFYSKTVWLWINPLLNRGYTTPLKMEDVPTLPLEFRAEKMSELFQEKWPKPEENCKHPVGITLLRCFWKHIAFTGFLAVIRLGVMYIGPVLIQSFVDFTSMANPSPYEGLGLILILLVAKTVEVLSVHQFNFHSQKLGMMIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMLQLHPIWLMPLQVAVALALIYYYVGLSVVAALLGTIVLFIFTVFRSKRSNSFQFRIMMSRDLRMKATNELLNNMRVIKFQAWEDYFGNKIQQFREAEHGWIGKFLYYFAVNMGVLSSAPLLITVLTFGTATLIGIPLNAGTVFTITSVIKILQEPVRTFPQALILISQALISLGRLDEFMMSKERDENAIQIEDNRDGDIAVEIKDAKFSWDDADGNEALKVEELVIRKGEHATVVGTVGSGKSSLLASVLGEMFKISGEVRVCGTVAYVAQTSWIQNATIQENILFGLPMNNEKYKEVVRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDIFSAVDAQTGSFIFKECIKGALKHKSILLVTHQVDFLHDVDSIMVMRDGRIVQSGKYDELLKAGLDFGALVAAHESAMEATETGDDAGDDPGQSPKLARVPSKEKESAGENQPEDQSNSDKGSSKLIEDEERETGRVNLQVYKHYFTEAFGWWGVALMLAMSLAWIVSFLAGDYWLAFATSQTSGISSATFITFYAIIAATACAVVMVRSVLFTYWGLRTSQSFFIGMLHSILHAPMSFFDTTPSGRILSRVSTDLLWVDISIPMLINFAMVAYFSVVSILIVTCQNAWETVFLLIPLVWLNNWYRKYYIASSRELTRLDSITKAPVIHHFSETISGVMTIRGFRKQGAFSQENTDRVNASLRMDFHNNGANEWLGFRLDFMGVVFLCIATVFMIFLPSAIIKPEYVGLSLSYGLALSGLLSVTITMTCSVENKMVSIERIKQFTNLPSEAAWKIPDRTPPQNWPSRGTIELNNLQVRYRPNTPLVLKGLSLTIKGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINISTVGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDAVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGYAKEYDKPSRLLERPTLFAALVKEYSNRSS* 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1328 1502 CDD ABCC_MRP_domain1 642 842 - -
Dod03g1328 1502 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Dod03g1328 1502 ProSitePatterns ABC transporters family signature. 767 781 IPR017871 GO:0005524
Dod03g1328 1502 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 60 1501 - -
Dod03g1328 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 861 IPR027417 -
Dod03g1328 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 608 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g1328 1502 Gene3D ABC transporter type 1, transmembrane domain 317 626 IPR036640 GO:0005524|GO:0016021
Dod03g1328 1502 Gene3D ABC transporter type 1, transmembrane domain 910 1243 IPR036640 GO:0005524|GO:0016021
Dod03g1328 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Dod03g1328 1502 SUPERFAMILY ABC transporter transmembrane region 318 620 IPR036640 GO:0005524|GO:0016021
Dod03g1328 1502 SMART AAA_5 1288 1472 IPR003593 -
Dod03g1328 1502 SMART AAA_5 669 850 IPR003593 -
Dod03g1328 1502 MobiDBLite consensus disorder prediction 870 922 - -
Dod03g1328 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1253 1495 IPR027417 -
Dod03g1328 1502 Pfam ABC transporter transmembrane region 966 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g1328 1502 Pfam ABC transporter transmembrane region 329 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g1328 1502 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 60 1501 - -
Dod03g1328 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 865 IPR003439 GO:0005524
Dod03g1328 1502 CDD ABC_6TM_ABCC_D2 943 1237 IPR044726 GO:0140359
Dod03g1328 1502 Gene3D - 637 868 IPR027417 -
Dod03g1328 1502 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Dod03g1328 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g1328 1502 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g1328 1502 Pfam ABC transporter 665 792 IPR003439 GO:0005524
Dod03g1328 1502 SUPERFAMILY ABC transporter transmembrane region 944 1248 IPR036640 GO:0005524|GO:0016021
Dod03g1328 1502 Gene3D - 1246 1496 IPR027417 -
Dod03g1328 1502 CDD ABCC_MRP_domain2 1260 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1328 Dod-Chr3 16867590 16876233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1328 1009 1495 Calmodulin-binding Proteins AT2G36910 24.803 1.89e-31 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1328 - K05665 gmx:100780167 2441.77