Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1322 ATGGACGGCAACAAGGACGAAGCGCTTCGGTGCGTTCGAATCGCCGAGGAGGCGATCGCAACCGGCAACAAAACCCGGGCCCTCAAATTCATCCGAATTGCTCAGCGACTCAACAACAATCTCCCCATCGACGCTTTGCTCTCCATGTGCGACCGCCTCGATTCTCAATCCTCAGCTTCACCCTCTTCCTCTTCCTCCTCAGAAGGAAAAAACCGCGTTAGCAGTGTTATCGACCAGGGTTTGAACGGAAACAAAAGCTACACCGACGAGAACGTGAAATTGGTTAGGGAAATCAAGTTGAAGAGCGATTACTACGCGATCTTGGGCGTTGAGAAGAGTTGTTCGGTGGAAGAGATTCGAAAGGCTTATAGGAAACTCTCGTTAAAGGTTCATCCCGATAAGAACAAGGCACCGGGTTCAGAAGAAGCGTTTAAGAAAGTCTCAAAGGCATTCAAATGCTTGAGCGATGGTGGTTCTAGAAGGCAGTACGATCAAACTGGTTTAGTCGATGAATTCGAGTATAATCAGCAGTACAATGTGCCTCGCCGGAGGAGGAGAACGGCGGCCACGGCGCGCGATTTCTTCGAGGAGGATTTCGATCCGGAGGAGATATTCAGGGCGTTTTTCGGACAGTCCGATGTTTTCGGGAGGGCTAATGTTTACAGGACAAGGGGTACAAGGCAGGAGTCTCGGGGTGGCGGCGGCAGCGGTGGTCGTGGAGGAGGAGGGCTTAGTATTATGCTACTTGTTCAGTTATTGCCTTTCTTGATCATTCTGTTGGTTGCTTACTTGCCCTTTTCGGAGCCTGAGTATTCTTTGCTCAAGACTTACTCTTACCAGGTTCCGAAAACTACAGAGAATTATGGGGTTCAGTTCTTTGTGAAGTCCGATGCTTTTGATCATGGCTACCCGCAGGGGAGTCCTGCTCGTGCCAAAGTTGAGGACAGTGTGATTAAGGACTATAGGAATATGCTTCGGCGGTATTGTCAGATAGAGGTTCAGAGGCGTAGCTGGAATAGGAATCTGCCTACTCCTCACTGTGAGAAGTTACAAAGCTTTGATGTAGAAGCCTGA 1074 0.4953 MDGNKDEALRCVRIAEEAIATGNKTRALKFIRIAQRLNNNLPIDALLSMCDRLDSQSSASPSSSSSSEGKNRVSSVIDQGLNGNKSYTDENVKLVREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDGGSRRQYDQTGLVDEFEYNQQYNVPRRRRRTAATARDFFEEDFDPEEIFRAFFGQSDVFGRANVYRTRGTRQESRGGGGSGGRGGGGLSIMLLVQLLPFLIILLVAYLPFSEPEYSLLKTYSYQVPKTTENYGVQFFVKSDAFDHGYPQGSPARAKVEDSVIKDYRNMLRRYCQIEVQRRSWNRNLPTPHCEKLQSFDVEA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1322 357 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
Dod03g1322 357 SUPERFAMILY Chaperone J-domain 102 215 IPR036869 -
Dod03g1322 357 Pfam DnaJ domain 103 164 IPR001623 -
Dod03g1322 357 PRINTS DnaJ domain signature 105 123 IPR001623 -
Dod03g1322 357 PRINTS DnaJ domain signature 123 138 IPR001623 -
Dod03g1322 357 PRINTS DnaJ domain signature 139 159 IPR001623 -
Dod03g1322 357 Pfam Domain of unknown function (DUF1977) 267 337 IPR015399 -
Dod03g1322 357 PANTHER CHAPERONE PROTEIN DNAJ 49 1 355 - -
Dod03g1322 357 PANTHER AT29763P-RELATED 1 355 - -
Dod03g1322 357 MobiDBLite consensus disorder prediction 56 80 - -
Dod03g1322 357 Gene3D DnaJ domain 100 221 IPR036869 -
Dod03g1322 357 CDD DnaJ 103 156 IPR001623 -
Dod03g1322 357 SMART dnaj_3 102 159 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1322 Dod-Chr3 16807078 16813054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1322 68 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.653 4.51e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1322 K09518 - mnt:21406269 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1322 03 16807078 16813054 Dod03g1322 03 16807078 16813054 ECH