Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1285 ATGGCAACTGAGCAGTTAATGTCCGGCGCCGGCGGCCCCCGCTACTTCCAGATGAAGTCATCGCCGCCGCCGTCACCGCCGGCGGCGGAGGAGATGTCGTCGGTGCCATCGTTCCGTCAAAGCAGCGCCGAAGCCACTCGGATTTTCGAAGAGTTGCCGAAGGCCAGCATCGTCTCGGTGTCTCGTCCCGACGCTGGCGATATAAGCCCTGTGCAACTCTCTTACACCATTCAGTTTCAGTACAAACAGTTTAAGTGGGAGCTAGTGAAGAAAGCTTCTCAAGTATTTTACTTGCATTTTGCATTAAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAGGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGATTAGGAGAGCACACTACTATGGTGCAAGATGACGATGAAGCTGATGATGAAACATTTGCTTCACATGCTGACGAAAGTGCCAAAAACAGAGATGTTCCATCTATGGCTGCTCTATCGATTATACGGCCAGCCTTAGGTAGACAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCGATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGTCCTAAGCTAAAAGAAGACTATGTGATGGTGAAGCATCTGCCCAAAATTCAAAAGGATGATGATTCCAGAAAGTGTTGTATGTCTGGATGTTTTAATTGCTGTAATGACAACTGGCAAAAGGTATGGGCCGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATACTCAGCCCTTAGACATTATTGTCTTTGATGTACTGCCTGCATCAGATGGGAATGGGGATGGACGTCTATCGCTAGCGGGTGAAGTGAAAGATCGTAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATGCGGAGCATTAGAATTAGAGTGAAAAGTAGCAGTAAAGTTAAAGATTGGGTCGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTTATCCTCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTAATTGAAGATGGTAGTCAAGCCCAGTGGTTTGTAGATGGGCGAGCAGCATTCGAGGCCATTGCTTCTTCAATTGAGGATGCAAGATCGGAGATATTCATCTGTGGGTGGTGGCTATGCCCAGAACTGTATCTTCGGCGACCTTTTGACACTCATGCTTCATCAAGGCTTGATTATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTATGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGCGTTTATAGCAAGAGAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTATGGTCACACCATGAAAAACTTGTCATCGTTGATAACCATATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACTCATCTGAGCATAAAGTGGGGGATTGTCCGCCTCTAATCTGGCCTGGAAAGGACTACTATAACCCTAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTGGAAAATATCCTCGGATGCCTTGGCATGATGTTCATTGCGCTCTTTGGGGACCACCTTGTCGTGATGTTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTAATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCAGTGAGATGCAGATTGAAAACAAGAGCACTGACATGAAGAGAGAAGATTCATTTTCTTCATTGTCCCAAGGCCAAGATGTTCCTCTACTTTTGCATCAGGTGTCTGGAGTGGTGGATGATCATGAAGGAGACCCAATACCGAATGGCCTAAGCTCCGTTTTACATCGCATTGATAAGCCAATAAAGGTCAGCAATGGTCTTCCTTTCTCTTTTCGGAAGGCCAAATTTGAAGCAGTTGGTCCAGATATGCCAATGAAAGGCTTTGTAGATGATCTGGACTCTCTGCATCATCATGATAAAATGTCTCTGGATAGAGTGGCTCATGTTGATATACAAAATTCTGATCAAGAATGGTGGGAAACACAAGAACGAGATGAGCAGGGAGGTTTTGAAGATGAATCAGGACAAGTTGGTCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGTCAAACCGAAGAGAGCATACACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAGATGATACGAAATCGTGTGTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACAATGAAAATAAATCCTTTAGGGTTATGATTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCAATAATGCATTGGCAGTACCGAACCATTTGCAGAGGGCAGAATTCTATATCACATAATCTTTATGAACTTCTTGGTTCAAGAATAGACGACTATATCTCTTTTTATGGCTTGAGGTCTTATGGTAGACTTTTTGATGGTGGACCTGTGGCAACCAGCCAGGTAATCTTTTGCATGTGTGGTCTCATACACCTAAATAGTTCTAATCAGCTTAATGATATGTATGCCTTTTGGCAGGTATATGTTCACAGTAAAATCATGATTGTTGATGATCGTATTAGTTTGCTTGGATCTGCTAATATTAATGATAGAAGCTTACTCGGATCCAGAGATTCTGAGATTGGAGTAGTTATAGAAGACAGAGAGTTGATTGGTTCGTATATGGATGGAAAGCATTGGAAAGCAGGAAAGTTCTCTTTGACTCTCCGATTGTCATTATGGACTGAGCACTTAGGTCTTCGTGCAGGAGAGGTCAATCAAATAATGGATCCAGTTATTGACTCTACTTACAAAGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCGTGCGTACCGAATGATCTGATACACACCAGACTTGCTTTTAGGCAGAGCGTAAAAGAGAGAGTTGGTCACACGACCATTGATTTAGGAATAGCGCCACAAAAATTAGAATCCTGTAATAATGGAGATGCTCAGAACACTGATCCTTTGGAGAGATTAGCATCAGTGAGGGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGTGTCAAGAAAGTCTAAGACCTGGTTTCAGCGAAAGCGAATACTACGCTGCTCAAGTTTTCCATTGA 3414 0.43 MATEQLMSGAGGPRYFQMKSSPPPSPPAAEEMSSVPSFRQSSAEATRIFEELPKASIVSVSRPDAGDISPVQLSYTIQFQYKQFKWELVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGLGEHTTMVQDDDEADDETFASHADESAKNRDVPSMAALSIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIQKDDDSRKCCMSGCFNCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLAGEVKDRNPLRHSFKVTCGMRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCYPHRYGSYAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDARSEIFICGWWLCPELYLRRPFDTHASSRLDYLLEAKAKQGVQIYILMYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSSEHKVGDCPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSSEMQIENKSTDMKREDSFSSLSQGQDVPLLLHQVSGVVDDHEGDPIPNGLSSVLHRIDKPIKVSNGLPFSFRKAKFEAVGPDMPMKGFVDDLDSLHHHDKMSLDRVAHVDIQNSDQEWWETQERDEQGGFEDESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNENKSFRVMIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSISHNLYELLGSRIDDYISFYGLRSYGRLFDGGPVATSQVIFCMCGLIHLNSSNQLNDMYAFWQVYVHSKIMIVDDRISLLGSANINDRSLLGSRDSEIGVVIEDRELIGSYMDGKHWKAGKFSLTLRLSLWTEHLGLRAGEVNQIMDPVIDSTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSVKERVGHTTIDLGIAPQKLESCNNGDAQNTDPLERLASVRGHLVSFPLEFMCQESLRPGFSESEYYAAQVFH* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1285 1137 CDD PH_PLD 199 346 - -
Dod03g1285 1137 Pfam PLD-like domain 939 984 IPR025202 -
Dod03g1285 1137 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 937 964 IPR001736 GO:0003824
Dod03g1285 1137 PANTHER PHOSPHOLIPASE 35 1134 - -
Dod03g1285 1137 PIRSF PLD_euk 918 1137 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod03g1285 1137 PIRSF PLD_euk 621 923 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod03g1285 1137 PIRSF PLD_euk 28 642 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod03g1285 1137 CDD PLDc_vPLD1_2_yPLD_like_2 772 981 - -
Dod03g1285 1137 SMART PH_update 222 350 IPR001849 -
Dod03g1285 1137 Gene3D - 249 348 IPR011993 -
Dod03g1285 1137 ProSiteProfiles PH domain profile. 244 348 IPR001849 -
Dod03g1285 1137 CDD PLDc_vPLD1_2_yPLD_like_1 376 521 - -
Dod03g1285 1137 SUPERFAMILY PH domain-like 242 346 - -
Dod03g1285 1137 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 483 510 IPR001736 GO:0003824
Dod03g1285 1137 Coils Coil 104 124 - -
Dod03g1285 1137 SMART pld_4 483 510 IPR001736 GO:0003824
Dod03g1285 1137 SMART pld_4 937 964 IPR001736 GO:0003824
Dod03g1285 1137 Pfam Phospholipase D Active site motif 483 510 IPR001736 GO:0003824
Dod03g1285 1137 Gene3D Endonuclease Chain A 370 608 - -
Dod03g1285 1137 SUPERFAMILY Phospholipase D/nuclease 334 603 - -
Dod03g1285 1137 MobiDBLite consensus disorder prediction 1 39 - -
Dod03g1285 1137 PANTHER PHOSPHOLIPASE D 35 1134 IPR015679 -
Dod03g1285 1137 Gene3D Endonuclease Chain A 714 999 - -
Dod03g1285 1137 SUPERFAMILY Phospholipase D/nuclease 753 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1285 Dod-Chr3 16339584 16352011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1285 1 1017 Phospholipase D Gene Family (Wang group) AT3G16785 71.429 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1285 K01115 - gmx:100780514 1961.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1285 03 16339584 16352011 Dod03g1285 03 16339584 16352011 ECH