Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1284 ATGATCTGTGTCTCGAAGAAAGAGAAAAGTTGTAGAAAAGATGATGAAAGAAAAGCTGCGGAAGCACTGGCAAAGGATGCAAGGAAGAATGGATTGTTATTGAGTTCATCTGGAACTGTTAAGTCTTCCAAGGCCAACAATTTTGCCTCTATGTTCACAGAGAAGGGCCAGAAAGGCGTCAAACACGATTGCCTAACTGTTTGGGAGGAATTCGGTTGCCAAGAAGACATGACTTTCTGTGGAGTTTTTAATGGACATGGCCCTAGGGGACACTATGTAGCCAACAGGGTCAGGAAGCTAGTTCCTGCTTCATTGCTATGCAATTTACCGGAAAATCTGGCTGCAACATCACTTGGCAAGAATTTCAAGATGGAATCAGACAGGAACCTCCATGGATTTGACATATGGAAGAAGGCCTACATAAAGACCTGTGCTGCAATCGATCAGGATCTAAAGCAGCATGCTGGGATTGATTCCTTTCAAAGTGGCACTACAGCTTTGACAGTTATCAAACAGGGTGAACATCTCATTGTAGCAAACTTAGGTGATTCTAGGGCAGTCTTGGCAACCACTTCTGATGATGGCACATTAACTGCCCTTCAGATTACCAATGACTACAAGCCAAATTTAGCAATGGAGGCGGAGCGCATAATGCAATCCAAAGGGCGTGTATTTTGTTTGGAAGATGAGCCGGGAGCGTACATTATGCCAAATGGTAAAACCCCAGGACTAGCAATATCTAGAGCATTTGGTGGCTACTGTTTAAAGGACTTTGGACTAATCTCTGTGCCACACGTGACACAAACAAAACTGACCACCAAGGATCAATTTCTCGTCTTAGCAAGTGATCGGGTATGGGATGTTATTTCCAACCAAGAAGCAGTGAAGATCATTGCTTCAACTATAGATAAAGACAAAGCTGCTCAAAGGCTCGTGAAATGCGCCATACATGAACGGAAGCGCCAGAGAAGAGGCATTGCTATTGATGATATTTAA 996 0.4357 MICVSKKEKSCRKDDERKAAEALAKDARKNGLLLSSSGTVKSSKANNFASMFTEKGQKGVKHDCLTVWEEFGCQEDMTFCGVFNGHGPRGHYVANRVRKLVPASLLCNLPENLAATSLGKNFKMESDRNLHGFDIWKKAYIKTCAAIDQDLKQHAGIDSFQSGTTALTVIKQGEHLIVANLGDSRAVLATTSDDGTLTALQITNDYKPNLAMEAERIMQSKGRVFCLEDEPGAYIMPNGKTPGLAISRAFGGYCLKDFGLISVPHVTQTKLTTKDQFLVLASDRVWDVISNQEAVKIIASTIDKDKAAQRLVKCAIHERKRQRRGIAIDDI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1284 331 ProSiteProfiles PPM-type phosphatase domain profile. 48 331 IPR001932 -
Dod03g1284 331 SMART PP2C_4 24 331 IPR001932 -
Dod03g1284 331 SUPERFAMILY PP2C-like 42 317 IPR036457 -
Dod03g1284 331 PANTHER ALPHABET, ISOFORM E-RELATED 5 331 - -
Dod03g1284 331 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 5 331 - -
Dod03g1284 331 CDD PP2Cc 57 331 IPR001932 -
Dod03g1284 331 Gene3D - 35 331 IPR036457 -
Dod03g1284 331 Pfam Protein phosphatase 2C 128 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1284 Dod-Chr3 16328533 16332290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1284 17 331 PP2C-type Phosphatase Gene Family AT3G05640 54.259 5.01e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1284 - - gmx:100814087 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1284 03 16328533 16332290 Dod03g1284 03 16328533 16332290 ECH