Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1268 ATGGCCATGGCGTTTCAAGTCCACAGCTTCTTCTCCTTCTTCATCATCATCTTCGCCGTGATCTTCGCCGCATCGCCATCGCTCTCTCAGCCACAAACCGCCGACTCCTGCAATGGAATATTCCTCTCGTACGCCTACACCGGCGGGGCGCGCCTCCCGCCGAACGTGTCCGATGCAGCGGAGCAGCCGTACAAGTTCACGTCATCGCTGACGGTTCTCAACAACGGCCTGGAGGAGCTCCAGTCGTGGAAGGTGTTCGTGGGGTTCCGGCACGGCGAGTGGCTGGTGTCGGCATCGAACGGGGTGCTGGCCGACGGCACGGTGCTCCCCGCTGGCGTCGGGAACGGGACGGTTTTCGAGGGGTCTCAGCTTACGGACCTGAAGACGGCAGCGGCGACTGCGGGGGACTTGGGGCAGATGATGGTTCAGGTGGAGATGGTTGGGACGGTGTTTGGGGTTGCGCCACCTAATGTGCCCATGCCTTCAACCATTACGCTGGCTAATGATGGATTTGTGTGCGGTACTCCAGCTGGTCAAGGGAACAATGAGACTCATGTATGTTGCACAAGTGATCCCAATTTCAAAACAAACATATCCACAGATGAAGAGTTCCTACCCCGTCAGAATGGTGATCTTAGCATAATGTATGATGTGATCAAAACATATGACTCCAATTACTGGGCAGAGGTCACAATTGCAAACCACAACCCTCTTGGCCGTCTTGACAGCTGGAGATTAAGCTGGGACTGGGGCAATGATGAGTTCATATACTCAATGAAGGGTGCTTATCCCTCTAATGTTGATTCTTCTGAATGTGTCTTTGGTCCACAAGGTGTATTCTACAAGGAGCTTGACTTTGCCAATGTGTTGAACTGTGAAAGAAGGCCAATAATTGTTGATCTTCCCCCCACAAGGCTCAATGATTCAGACCTAGGCAAAATCCCATTTTGCTGCAGGAATGGTACCATATTGCCACCAACAATGGACCCTAGTAAGTCAGCTTCAAGGTTCCAAATGCAGGTCTTCAAAATGCCACCAATCCTTAACCGTTCCCAGCTTGCGCCGCCACTGAACTGGGAGATAAGTGGCACATTCAACCCTGATTACCAATGTGGCAATCCCATAAGGGTGAGTCCTAGTGAGTCTCCTGATCCAACAGGCTTGCCATCAAACATATCCGCTGTTGCCAGCTGGCAGGTCGTGTGCAACATAACAAAGGCCAAAGATGCAACAAGTAAATGCTGCGTCTCATTTTCAGCATTTTACAATGAATCTGTTATTCCTTGCCAAACATGTGCATGTGGATGCCCCAGAAACCCGGAGAGAACATGTAGCACCACTGCACCAGCTATGTGGCTTCCCTCAGAGGCACTCCTTGTTCCTTTTGAGAATAGAAGCAACAAGGCTCTTGCTTGGGCTGACATGAAGCATCTACCAGTACCTAACCCCATGCCTTGTGGAGACAACTGCGGCGTGAGCATCAACTGGCATGTGTCTACTGATTACCGGAAAGGTTGGACCGCGAGGATCACGCTTTTCAATTGGGGTGAGACTGATTTTGCAGACTGGTTTGCTGCAGTGCAAATGGACAAAGCAGCTCCTGGTTTTGAGGAGATGTATTCATTCAATGCAAGTTCCTTGGACAGTGTGAATAACACGATATTCATGCAAGGTAAACCGGGATTGAACTTTCTTGTGGCAGAAACAAATGGATCTGACCCTAGGAGAGATCCTAAGGTGCCTGGGAAACTGCAGTCTGTGATCTCATTTACAAAGAAAATTACTCCTGGAATCAATGTGGCTGGTGGCGCTGGGTTTCCAAGTAAGGTCTTCTTCAATGGGGAAGAATGTTCTCTTCCTTTGGTACATCCAAGCAGTGGTTTCAGGAATGAGTTTTCGTTGGTTTCTATGATGTTCCTAGTTCTGTTGCCGATCATCTGGATTTGGCAATAG 1953 0.4987 MAMAFQVHSFFSFFIIIFAVIFAASPSLSQPQTADSCNGIFLSYAYTGGARLPPNVSDAAEQPYKFTSSLTVLNNGLEELQSWKVFVGFRHGEWLVSASNGVLADGTVLPAGVGNGTVFEGSQLTDLKTAAATAGDLGQMMVQVEMVGTVFGVAPPNVPMPSTITLANDGFVCGTPAGQGNNETHVCCTSDPNFKTNISTDEEFLPRQNGDLSIMYDVIKTYDSNYWAEVTIANHNPLGRLDSWRLSWDWGNDEFIYSMKGAYPSNVDSSECVFGPQGVFYKELDFANVLNCERRPIIVDLPPTRLNDSDLGKIPFCCRNGTILPPTMDPSKSASRFQMQVFKMPPILNRSQLAPPLNWEISGTFNPDYQCGNPIRVSPSESPDPTGLPSNISAVASWQVVCNITKAKDATSKCCVSFSAFYNESVIPCQTCACGCPRNPERTCSTTAPAMWLPSEALLVPFENRSNKALAWADMKHLPVPNPMPCGDNCGVSINWHVSTDYRKGWTARITLFNWGETDFADWFAAVQMDKAAPGFEEMYSFNASSLDSVNNTIFMQGKPGLNFLVAETNGSDPRRDPKVPGKLQSVISFTKKITPGINVAGGAGFPSKVFFNGEECSLPLVHPSSGFRNEFSLVSMMFLVLLPIIWIWQ* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1268 650 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
Dod03g1268 650 PANTHER COBRA-LIKE PROTEIN 7 3 648 - -
Dod03g1268 650 PANTHER COBRA-LIKE PROTEIN 7 3 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1268 Dod-Chr3 16036356 16040413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1268 37 634 COBRA Gene Family AT4G16120 65.008 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1268 - - gmx:100778971 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1268 03 16036356 16040413 Dod03g1268 03 16036356 16040413 ECH
Dod05g2632 05 52547500 52551136 Dod03g1268 03 16036356 16040413 PCT