Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1255 ATGGACATCGCCCCTAGCACTCAGTACCACCAAGTCACTATGAGTGCATCAGAAAACCCTAGCCTTCATAACCCTGCAGAGGCCAAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCACTTCCTCCTCAACAACTTTGAAGCTCTTCGGTTTCCCCCTAACACCATCAACACTCCATGATGTTCCTTGTGTCAACAACAACAACGACGACAACAAGAGGTTCAAATGCCTCTTCTGTTGCCGCGAATTCGCCAATTCTCAAGCACTTGGTGGCCACCAAAACGCTCACAAGAAAGAGCGCCAAAGGGCCACTCTTGCACGCTTCCAACACTCTCTTCCTCTTCCCATCCATCCCCATCACCAACGCTTCTTCATAAATTCCCCTTATAGTTATAATCCTATGATGGTTGCTACACATGGAGCATCATCATCATCATCAGGCTCATCACGACCGTTTATTTGTCCACCTCGTCATCATCATCATGGAGCTTATTGGTTCCCTCCTAGTGCAAGGGTCCCACAAGCTCTGTCCTCTATGATCCCTCATAAGGATCCTTTTGATGATGACGATGATGAGCTTATTCCTGTTGTTGTGAGACCAAATGGCGGAGCAGGCGTGGCCAGAGAAAAGGGGCCCTTGATATTGCAAGTACAGAATATAGATGGCGATGTTGATCTTAACTTGAGGCTTGGTAGCACAATACCCTCCACTTCCTCCAAGGACAATAAGGAACTGTAG 747 0.4712 MDIAPSTQYHQVTMSASENPSLHNPAEAKPSSSSSSSSSSSPTSSSTTLKLFGFPLTPSTLHDVPCVNNNNDDNKRFKCLFCCREFANSQALGGHQNAHKKERQRATLARFQHSLPLPIHPHHQRFFINSPYSYNPMMVATHGASSSSSGSSRPFICPPRHHHHGAYWFPPSARVPQALSSMIPHKDPFDDDDDELIPVVVRPNGGAGVAREKGPLILQVQNIDGDVDLNLRLGSTIPSTSSKDNKEL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1255 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Dod03g1255 248 PANTHER ZINC FINGER PROTEIN 6-LIKE 29 235 - -
Dod03g1255 248 PANTHER ZINC FINGER PROTEIN 5 29 235 IPR044299 GO:0010090
Dod03g1255 248 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Dod03g1255 248 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Dod03g1255 248 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1255 Dod-Chr3 15870077 15871129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1255 43 122 C2H2 Transcription Factor Family AT1G67030 41.489 1.67e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1255 - - ahf:112740291 121.324