Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1253 ATGGGAGTGGAAAAAAAAGAAGGGACAAAAAGTGGTTTTTTCCAGTTGTTTGACTGGACCTCAAAATCCCGTAAGAAATTATTTGCAACCAAGTCAGACTTACCAGAGCCTTTGAAACAGGGAAGAAAAATTGATTACAATGTGACAATGACACAACCCTTTCTGGGGGAGGTGGATGAAGATGAAAATGGAGAAGGGGCAAGTGTTAGAGGAAGTTGTGATCATAGCTATGCTTCATCTGTTACAGATGATGAATCATTTGGAACAAGGGCTCCTGGCGTAGTTGCCAGGCTTATGGGATTGGATTCCTTGCCCCCTTCCAGTTTGTCTGATCCATATTCTACCCCATATTTTGATACTCGATCCCTTCAAGATGCTCAATACTTCAGGAAAAACCTCAATCAACAGCATGACCATCAGTCCCTATATTCTGGAAAGCTAGTTGAAAAAGTTGAGAGCTCTTCTAGGAACTTTATGGAGCCAAAGCCTCAAAAGACCCTTACAAGGCCAATTGAAAAGTTCCAGACAGAAGTACTGCCTCCAAAATCGGCTAAAACAATTCCCGTTACACACCACAAACTTTTATCTCCTATTAAGAGTCCAAGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTGCTTCCCAACCTAGTACAAGGACAAAAACACCAGTCGTAGCATCATCTACAGTGTCATTGAGGGTTAAAGATCTTAAGGATAAAGTGGAGGCTTCACAAAAAGGATCTCTAATTGGACCATCTTCAATGACCTCTAGAGCTCGAGATCTAAAAGGAAAAAAAGAAATCTCTTACAGAACAACCAGGCTTGCAGAGCATTCTCAAAGGTCGGTTGAGTCGAATACTGCCAAGTATCTGAAGGGACAATCTCTAAACAAAAGCTGGAATGGATCTGTGGATACTTCCATCAGATCCACAGTTCATGCAGAAGAAGATTCTTCTTCGAAGAACTCGGGGAAGTCTATTTCGCTTGCAATCCAAGCAAAAGTAAATGTTCAAAGAAGGGAAGGGTTGAGTTCAACCGGTGGCAGAAGTTTGGCAGGCCAGAAAGAGCAACCTGACATTAAACCCAACCAGCCGTCGAAGGCAAATGTTCAGAAAAATTTGCATAAGAAATCTTCTAGTCGCAATTCTTCTGGTGTTCTCAGGCAGAATTGTCTGAAACAGAATTATTCAATTGAGAAAGACAAATTGCCATCAAAGCCAATGGTTTCCAATTCACACAGTAGAAAAGTTCTGACTGGGGATTCCCCTTATGGACGTCATACAAGCACTAGTAGTAAATCTGTCTCAAAATCCAAAGTTGGATCCAGAAAGTCAGTGATGGAGGTGACAGATAGTGAAAAGGAAGTTTTATATACTAGTACAAACAGTTTCCCTAGAAAGAAGAGGTCTACAGATAAGGACTGGAATGACAGGGTTGTTGATAATTTGTTTATTGACAAAACTCCGAAGCCTGTTCAGTCTAATTTACTAACTAATAAGCAATATAGTTGGCCCAAAGAAGTCAAGAAGAAAGACATGGATGTAGTTTCTTTCACATTTACCACACCATTAACAAGGAACAATCCTGGTTTTGAGACATCTGGGCAAGCTGGCCAGAAGACTGATGGTCTTTCCTTGGATCAACGCATTAAAAGAGTGTTGCTTGACACAGACAATACAAGGTCTCCAATAGGATACAATGTGATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTAACGCATGGAATTGAGACATCTTGCCATGAAGTTTCTAAAACGAGGCAACCTTCCAGTACTGCTCCGAAATCAATTGATCAAGGAACCTACCTGGTTAACCTCAATCCAAGGCTGCAACTGAAGAAGGACCAAGACAAGTTAAGCAATAGCCATGATTCTGACATCTCCTTGAGTGGTCTTTCTGAGTTATCATTGAAACATAACTCATGGGTTGATGAGATGGAACCACAGTTATTCAATTGCCGACACCCAAGTCCAATTTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGATTCTTCGATGAGCACAGATATCACTAGTGCAGAAGGAAGCAAGCTGTGCTCATCTGTTCAAGCTCAGGAAGTTCAAGGCTTGACTTTTTCGAGGAAGTTCTATCCTGCTGAATCGGAGACCGAGTTATCCGATTCAGCTTCTTCGACATCAACCGGGACCATGGCGAACAAGCACACAAGTGCATTTTCTGTCATCAAGTTTTTTAGAGCAAGTACATGGGAGTTGGACTATGTGAAGGATATATTGTGTAATGTGGAATTGGTGTATATGGACTATTCCCTCGGCCGTGTGAGCGAGATTGTCGACCCTTATCTGTTTGACCAGTTGGAAGGCCGAAAGGTACGGTTTGAATGTGACAATGAGTCCAGGATGAGAAGGAAAGTTACATTTGATTGTGTAAGTGAGTGCTTGGACTTGAGATGCAAGCGTTACGTTGGTGGAGGATACAAAATGTGGGCCAAAGGGGCTGCAATGGTGAAAAGAAATGAATGGTTGGCAGAAGATGTGTACAAGGAGATTGCAGGTTGGAGAGGGATGGGGGATTCAATGGTGGATGAGCTTGTTGACAAGGACATGAGCAGCCAATATGGAAGGTGGCTGGATTTTGAGGTTGATGCTTCTGAGCTTGGAGTGGAGGTTGTGGACCAAATATTCAATTCTTTGGTTGATGATGTTGTTGCTGAAATATTGCAATTGTAA 2784 0.4195 MGVEKKEGTKSGFFQLFDWTSKSRKKLFATKSDLPEPLKQGRKIDYNVTMTQPFLGEVDEDENGEGASVRGSCDHSYASSVTDDESFGTRAPGVVARLMGLDSLPPSSLSDPYSTPYFDTRSLQDAQYFRKNLNQQHDHQSLYSGKLVEKVESSSRNFMEPKPQKTLTRPIEKFQTEVLPPKSAKTIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPASQPSTRTKTPVVASSTVSLRVKDLKDKVEASQKGSLIGPSSMTSRARDLKGKKEISYRTTRLAEHSQRSVESNTAKYLKGQSLNKSWNGSVDTSIRSTVHAEEDSSSKNSGKSISLAIQAKVNVQRREGLSSTGGRSLAGQKEQPDIKPNQPSKANVQKNLHKKSSSRNSSGVLRQNCLKQNYSIEKDKLPSKPMVSNSHSRKVLTGDSPYGRHTSTSSKSVSKSKVGSRKSVMEVTDSEKEVLYTSTNSFPRKKRSTDKDWNDRVVDNLFIDKTPKPVQSNLLTNKQYSWPKEVKKKDMDVVSFTFTTPLTRNNPGFETSGQAGQKTDGLSLDQRIKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTHGIETSCHEVSKTRQPSSTAPKSIDQGTYLVNLNPRLQLKKDQDKLSNSHDSDISLSGLSELSLKHNSWVDEMEPQLFNCRHPSPISVLEPSFSIESCDSSMSTDITSAEGSKLCSSVQAQEVQGLTFSRKFYPAESETELSDSASSTSTGTMANKHTSAFSVIKFFRASTWELDYVKDILCNVELVYMDYSLGRVSEIVDPYLFDQLEGRKVRFECDNESRMRRKVTFDCVSECLDLRCKRYVGGGYKMWAKGAAMVKRNEWLAEDVYKEIAGWRGMGDSMVDELVDKDMSSQYGRWLDFEVDASELGVEVVDQIFNSLVDDVVAEILQL* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1253 927 Pfam DUF761-associated sequence motif 79 108 IPR032795 -
Dod03g1253 927 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 925 - -
Dod03g1253 927 MobiDBLite consensus disorder prediction 61 86 - -
Dod03g1253 927 PANTHER EXPRESSED PROTEIN 1 925 - -
Dod03g1253 927 MobiDBLite consensus disorder prediction 417 453 - -
Dod03g1253 927 MobiDBLite consensus disorder prediction 252 277 - -
Dod03g1253 927 MobiDBLite consensus disorder prediction 348 462 - -
Dod03g1253 927 Pfam Domain of unknown function (DUF4378) 769 919 IPR025486 -
Dod03g1253 927 MobiDBLite consensus disorder prediction 348 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1253 Dod-Chr3 15839180 15844504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1253 1 925 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.702 6.09e-97 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1253 - - gmx:102669513 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2624 05 52480424 52484285 Dod03g1253 03 15839180 15844504 PCT