Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1241 ATGGCAAAGTCAAAGAACCACACAACTCACAACAAGTCCTACAAGGTCCACAAGAATGGCATCAAGAAACCTATGAGGCACCGCCACATTTCCACCAAAGGGATGGATCCAAAGTTTCTGAGGAACCAGAGGTACACAAGGAAGCACAACAAGAGTGGTGAAGCAGCCACCGAGGAAGAGTGA 183 0.4809 MAKSKNHTTHNKSYKVHKNGIKKPMRHRHISTKGMDPKFLRNQRYTRKHNKSGEAATEEE* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1241 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 - -
Dod03g1241 60 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Dod03g1241 60 PANTHER 60S RIBOSOMAL PROTEIN L29 1 60 IPR002673 GO:0003735|GO:0005840|GO:0006412
Dod03g1241 60 MobiDBLite consensus disorder prediction 30 60 - -
Dod03g1241 60 MobiDBLite consensus disorder prediction 1 60 - -
Dod03g1241 60 Gene3D - 1 60 - -
Dod03g1241 60 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1241 Dod-Chr3 15709547 15709870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1241 1 60 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 77.049 1.34e-28 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1241 K02905 - csin:114294630 112.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2613 05 52396862 52397966 Dod03g1241 03 15709547 15709870 PCT