Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1221 ATGAAGCGATATGTTTGCATCAGTGATGATGAATCATCACAGGATTTGTACTGTGATAATCGAATATCAAACAGAAAATATACTATATTGAACTTTATTCCAAAAAATTTATGGGAACAGTTCAGAGGTATGATATGCATTGGACTGAAGCGCTTTCAGAAGGCATTGGACCGTCTACATAATGTTGTAACTGCTCCAATGTCTACATTGAATGCTATAGTCGTTGAAGCTTATAAAAAGTATATATTAGTTTCTCTCATTCATCATGGACAGGTAAGCATTTACATTCTCTCTTTTTTTATACTTGACAAGAAAATTGCAGAATTGGAGGCTTATGTCAAGACAAATACAGAGAAGTTTGAAAATGACAACAATCTTGGACTGGTTAAGCAAGTTGTATCATCTATGTATAAGCGAAATATTCAAAGGTTGACCCACACATACTTGACCCATTCTCTCCAAGATATTGCCAGCACAGTTCAGTTAAATGGTCCCAAGGAAGCAGAAATGCATGTGCTACAAATGGTGGTGCTTTTAACTCTTCTGTTTTCGGCCATCTTGTGCCATTAA 570 0.3579 MKRYVCISDDESSQDLYCDNRISNRKYTILNFIPKNLWEQFRGMICIGLKRFQKALDRLHNVVTAPMSTLNAIVVEAYKKYILVSLIHHGQVSIYILSFFILDKKIAELEAYVKTNTEKFENDNNLGLVKQVVSSMYKRNIQRLTHTYLTHSLQDIASTVQLNGPKEAEMHVLQMVVLLTLLFSAILCH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1221 189 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 39 94 - -
Dod03g1221 189 Pfam PCI domain 104 177 IPR000717 -
Dod03g1221 189 Pfam Phospholipid-translocating ATPase N-terminal 11 43 IPR032631 -
Dod03g1221 189 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 104 176 - -
Dod03g1221 189 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1 39 94 - -
Dod03g1221 189 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1 104 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1221 Dod-Chr3 15278123 15279916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1221 1 41 Primary Pumps ATPases AT5G44240 75.610 9.27e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1221 K12177 - gmx:100783340 198.749