Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1219 ATGGAAAACTTGAGCCCTTTCAGTGAGTTCAGTTTCGGTGCAGCTGAGGACAAACATAGTTCATCCAATGATGTTTTCTGGGCTACCAATGAAGTGAGCAAGGTTCAATTTTCAGGAGCAGAAGATAGGGGAGAGTCAGGGGGAATTGACTCTTTTTGCTCTGATTTTTGGTTCTTTTCAAATGATCCATCAGAAGCAGAAGAAGGGTACCCTGTATTCACTGATCAGCAAAAGGGTCACCACCAGCAACTACCATATCTGGATTATGGACCATTGGATAACAACCTTCAGTTTGACATGGTGTCTCCACCACCACAGCTCCAAACTTGCCTTCGTGGTGGTGACATTCTCATGTTTGATAAACAACTTCAACCAGTGGTTCCAATTCCACTATGTGAACAATCAACAAAGGAGAATCAATACTCAACTCCTTTAGCCTCGCTAGAGCTCTTGAAGAGCTATGGCAATAAGGGGCTCAAGAGGCTGTATGATGAAGGGAAAACCACGCAGCCAAACGATGATTTGGCAGCACAATTAGCCACTGGTGAAGTTGGGAGGAAGCTGTCAACTGAAGACGTCATGAGGATAGCTGGGACAAGGTTCATCCAATCATCATCTTCAGGATCATCATCAGGTTTGAGCAACTTGGTTAGCCACCCTTTTGGTTTTTCTTTCTCTGGACTCTCTGATGAGGAGAGAGAGGATGTGGAACTTGCTGAATCACTCTTGGCTTGTGCTGAGAAAGTTGGATATAAGCAGTTTGAGCGTGCTGCCAATTTGCTAAGTCACTGCGAGTCTTCGTCATCCATGACCGGGAACCCGGTTAAGCGCGTCGTTCATTATTTTGCCGAAGCTCTTCGCCTGAGGATAGATGTAGAAACAGGAAGAGTTTCATCCAAAGAGTTGAAGAAGATGATGTCATTTGATCCTGAAGTGGTTACCAAGGATCTTAACCCAACTCTTTTGGCATATTATCAAGCGGTTCCTTTCCCTCAGGTTGCAATCTTCACAACAGCCCAAGCTGTGATAGAAAATGTAACGGATGCAAAGAAGATTCACATTATTGATCTTGAAATCAGGAAGGGGGGACAATGGACAATCCTGATGCATGCCCTTCAGTCCAGGCATGAATGTCCAGTTGAGCTTCTAAAGATAACAGCTGTTGGAAGCGGAAACATTTCAAAGCGCATCATTGAGGACACTGGTAAGAGATTGGAGGATTTTGCACTGAGCTTGAACATACCCTTCTGCTTCAACGTAGTAATGGTACCAGATATGCTGCAGCTTAGCGAAGACCTTTTCGAAATAGACCCTGATGAAGCAATTGCAGTTTACTCTCACCATGCACTGAGCAGCATGATTAAGCAACCAGATCAGCTTGAAACTATCATGAGAGTGGTTAGAACCTTAAGGCCTAATGTAATGGTGGTAGCTGAACTTGAGGCAAACCACAATTCTGCATCATTTGTGAACCGTTTCATTGAGGCCCTCTTCTACTTCAGTGCGTTCTTTGATTGTTTGGCGACCTGTATGAGGCGAGACAAGCCGAACCGGATGAGTTTCGAATCGCAATACTTTGGTCATGGAATCAAGAACATTGTGGGTGTAGAAGGAGCAGAAAGAAAAGGTAGAAATGTGAAGATTGATGTGTGGAGGGCTTTCTTCTCCCGGTTTGGAATGGTGGAGACAGAGCTGAGCATGATGTCTTTGTTCCAAGCTAAACTGGTTGCTAAAAGGTTTCCTTGTGGAAGTTATTGTACATTTGATATGAAGGGGAACTGCCTTCTTTTAGGGTGGAAGGGAACGCCAATTAACTCTATTTCTGTCTGGAAATTCCTTTGA 1842 0.4425 MENLSPFSEFSFGAAEDKHSSSNDVFWATNEVSKVQFSGAEDRGESGGIDSFCSDFWFFSNDPSEAEEGYPVFTDQQKGHHQQLPYLDYGPLDNNLQFDMVSPPPQLQTCLRGGDILMFDKQLQPVVPIPLCEQSTKENQYSTPLASLELLKSYGNKGLKRLYDEGKTTQPNDDLAAQLATGEVGRKLSTEDVMRIAGTRFIQSSSSGSSSGLSNLVSHPFGFSFSGLSDEEREDVELAESLLACAEKVGYKQFERAANLLSHCESSSSMTGNPVKRVVHYFAEALRLRIDVETGRVSSKELKKMMSFDPEVVTKDLNPTLLAYYQAVPFPQVAIFTTAQAVIENVTDAKKIHIIDLEIRKGGQWTILMHALQSRHECPVELLKITAVGSGNISKRIIEDTGKRLEDFALSLNIPFCFNVVMVPDMLQLSEDLFEIDPDEAIAVYSHHALSSMIKQPDQLETIMRVVRTLRPNVMVVAELEANHNSASFVNRFIEALFYFSAFFDCLATCMRRDKPNRMSFESQYFGHGIKNIVGVEGAERKGRNVKIDVWRAFFSRFGMVETELSMMSLFQAKLVAKRFPCGSYCTFDMKGNCLLLGWKGTPINSISVWKFL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1219 613 Pfam GRAS domain family 239 611 IPR005202 -
Dod03g1219 613 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 611 IPR005202 -
Dod03g1219 613 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 38 611 - -
Dod03g1219 613 ProSiteProfiles GRAS family profile. 229 611 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1219 Dod-Chr3 15263645 15266467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1219 230 612 GRAS Transcription Factor Family AT1G66350 28.385 6.35e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g1219 GRAS 1.5e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1219 - - adu:107483434 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1219 03 15263645 15266467 Dod03g1219 03 15263645 15266467 ECH