Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1218 ATGGACAACCAGCAAGAGCAACAACTAATAGTAGGAAAGGTATGTGAAATCTATGAAAAAATCTCTATGTTACAAAACCTCAATCCCTCCAATCATGTCAATTCACTCTTTACCCAACTAGTAACAATTTGCACCACCCCATGTCCTGTAGATGTTACTAAGCTATGCAAGGAGGTCAGAGAAACCATATCTAAGCTAATTAGACTTTGTGGCAAAGCTGAGGGACTTCTTGAAAGCCATTACTCTACTCTCATAGGATATCATGAGAACCCATTAAACCACATCAAACTCTTCCCTTACTACTCCAATTACCTCAAACTTAGCCACTTGGAATTCACCATGCTCTCTAGACACTGCACTCAAATTCCTTCAAAACTTGCCTTTGTTGGCTCTGGCCCCCTCCCTCTTACCTCAATCATTTTGGCCACCTATTACCTAAGGCACACATGCTTCCACAACTATGACATGGATCCAACTGCAAATTCAAAGGCTCATGACTTGGTCTCATCAGACCCGGAGTTGTCCAAAAGAATGTTCTTCCACACTGCTGATATTGCTGATGTGTCAAGTGGCCTTAAGGAGTATAATGTTGTGTTCTTGGCAGCACTTGTTGGAATGGACCATAAGGAGAAATCAAAAGTGATCAATCACTTGGCCAAACACATGGCTCCTGGCGCTATTCTTTTGCTAAGGAGTGCACATGGAGCTCGAGCATTCCTCTACCCAGTTGTTGATCCTCGTGATCTCAAGGGGTTTGAGGTTCTATCAGTTTTTCACCCAAGTGATGAGGTCATAAATTCAGTTATTGTTGCAAGGAAGCATTCAGTGAATCAAGGGCTTTACTCACCAATGTTGTCTAGCAAATGTTCTGAAGTTGAAGGCATTATTATCAATCCCTTAAACCATGGGAACATTATTGATGAGTTGGCCATTGATGAGCAGGCTTGA 948 0.4209 MDNQQEQQLIVGKVCEIYEKISMLQNLNPSNHVNSLFTQLVTICTTPCPVDVTKLCKEVRETISKLIRLCGKAEGLLESHYSTLIGYHENPLNHIKLFPYYSNYLKLSHLEFTMLSRHCTQIPSKLAFVGSGPLPLTSIILATYYLRHTCFHNYDMDPTANSKAHDLVSSDPELSKRMFFHTADIADVSSGLKEYNVVFLAALVGMDHKEKSKVINHLAKHMAPGAILLLRSAHGARAFLYPVVDPRDLKGFEVLSVFHPSDEVINSVIVARKHSVNQGLYSPMLSSKCSEVEGIIINPLNHGNIIDELAIDEQA* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1218 315 Gene3D Vaccinia Virus protein VP39 8 275 IPR029063 -
Dod03g1218 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 2 278 IPR004298 GO:0030410|GO:0030418
Dod03g1218 315 Pfam Nicotianamine synthase protein 4 276 IPR004298 GO:0030410|GO:0030418
Dod03g1218 315 PANTHER NICOTIANAMINE SYNTHASE 3 1 315 IPR004298 GO:0030410|GO:0030418
Dod03g1218 315 PANTHER NICOTIANAMINE SYNTHASE 1 315 - -
Dod03g1218 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 234 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1218 Dod-Chr3 15259166 15260113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1218 5 276 Nicotianamine Synthase Gene Family AT1G09240 60.000 5.54e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1218 K05953 - gmx:100814069 496.893