Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1212 ATGGTTGACAGTACTGAGAGCAAGGTTCTTATAAGAGAATTTGATGAAAATAGAGATGTCAAGGTGGTGGAGAAGCTTGAGAGGAACTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGGCCCTTTATCTAGGATTAGGTTCTACCCCCTGCGTGTTATGTTGGTAGCGGAGCTGCTTGAAAGTAGGGAGCTTGTGGGAGTAGTGAGGGGATGCATTAAGAGTGTGGGAACTCCTTCTGGTTCACTCTTGAAGATGGGATGCATCCTAGGCCTTAGAGTCTCTCCTACTTACAGGAGAAAGGGGGTTGCACTAAAACTTGTTACCTCAGTTGAAGAATGGATGCTGAGAAATGGAGCTGAGTACTCATTCCTAGCCACTGAAAAGAACAATGATGCCTCTAAAACCCTATTTGCAATCAAATGCAACTATGTGAATCTCAGCTCACTTGTCATATTTGTCCACCCTACTAGCTCCCCTACAAAGCATATCTCTAGGGATATAAAAATAGACAAGTTGAACATAGATCTAGCAATTTCCTTGTACAGGAGAACCTTAAGGACCAAAGAGTTATATCCATTAGACATGGACACTATTCTCAAGGAAAAACTAAGCCTGGGAACATGGGTAAGTTATTACAAAGATGAGGGCTGCCTCAACTTGCAAAGAATGGTAGATAATGAAGATAATGTTACTACCAATGAAACCTCAAGCTCATGGGTCATCTTTAGCATATGGAATACATGTGAAGCTTATAAGCTTCAACTCAAAAAGTCTCAGCCGCTAAGGTTTCTTCATTCAACATTAAACCATGCAAGAGAGAAGATTTTCCCTTGTCTTAGAATGTCAGTGAGTGACTCATCATTAAGTAGGCCTTTTGGTTTTCTCTTCCTATATGGACTCCATGGAGTGGGAGAGAACCTTGGGGAGCTCATGGAATCCATATGGAGGTTCACATCAAGGTTGGGAGAAAGCATGAAGGACTGCAGAGTTGTTATAACTGAGTTAGGGTTGGGTGATCCACTTGCCAACCATGTCCCTCACACAGACTCTATGTCATGCATTGATGATCTCTGGTACACAAAAAGGCTTTCAATTAGCCCCAGCCATGATGAAATGGATGAACTGCAGATGAAGGGACAAGTAGGGAATATTTTTGTTGACCCTAGAGATTTTTAG 1197 0.4227 MVDSTESKVLIREFDENRDVKVVEKLERNCEIGTKKGVSIFTNMMGGPLSRIRFYPLRVMLVAELLESRELVGVVRGCIKSVGTPSGSLLKMGCILGLRVSPTYRRKGVALKLVTSVEEWMLRNGAEYSFLATEKNNDASKTLFAIKCNYVNLSSLVIFVHPTSSPTKHISRDIKIDKLNIDLAISLYRRTLRTKELYPLDMDTILKEKLSLGTWVSYYKDEGCLNLQRMVDNEDNVTTNETSSSWVIFSIWNTCEAYKLQLKKSQPLRFLHSTLNHAREKIFPCLRMSVSDSSLSRPFGFLFLYGLHGVGENLGELMESIWRFTSRLGESMKDCRVVITELGLGDPLANHVPHTDSMSCIDDLWYTKRLSISPSHDEMDELQMKGQVGNIFVDPRDF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1212 398 Pfam Acetyltransferase (GNAT) family 63 145 IPR000182 GO:0016407
Dod03g1212 398 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 398 - -
Dod03g1212 398 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 144 IPR016181 -
Dod03g1212 398 CDD NAT_SF 60 131 - -
Dod03g1212 398 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 398 - -
Dod03g1212 398 Gene3D - 38 161 - -
Dod03g1212 398 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 211 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1212 Dod-Chr3 15212924 15214629 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod03g1212 Acetyltransf_1 7.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1212 - - gmx:100814448 635.565