Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1206 ATGGGAAGCCCAGAAACAGCATCACAAGAAGAAGAGCTTGTGAAGAAGATTGAGAGGCTTGAAGCAGGACACGCTCACCTCAAGCAAGAGATGACAAAGCTCAAGCTTTCTGAGCGCCGCCATCATCGCCACAGGTCTCACTCCTTGTCACCACAGCGTTCAAGGCTTGGTGGTGGTGGTGCTGCTTCTGCAACAACAACATGTAACAAAGGGTCTTCTTGTTCACCCTTGAAGAAGGAGAGTCATAGCAGCCATCATCATCATCAACAGCAACAGCATCAGAATGATGGTGAAGTTTGTGTGAGTGCGAGGCTTAATGATAAGCAGTATATGAACATTTTGCAATCAATGGGGCACTCACTTCACGTATTGGATCTTCAATGCCATATCATATACTGGAATCCTAGTGCTGAAAAACTGTATGGTTATGAAGCAGAGGAGATTCTTGGCAAGGATGGGATTGAGATGCTTGTAGACCCCAGGGATTTCTCCTTGGCCAATGATGTATTCAACCATGTCACAATGGGGGAGAGCTGGACTGGCCAGTTCCCTGTTAAGAATAAGATGGGGGAGAAGTTTATAGTTGTGGCGACCATTACGCCTTTCTATGATGATGATGGGAAGTTGGTTGGGGTTATTTATGTGTCAGCTGATTTGCGACCCTTTCTTGAAATCAGAGTTCCATTCTCAAATGTGAAGAATGCTGAACCTGATTCAGGTTCCAACCGTCCGAAAAGTAGCAATTCTAATAAAGTTGGCCTCGATTCTCAGCAGCCACTTCAAGTTGCTCTAGCCTCCAAAATTTCTAATTTGGCATCAAAGGTGAGTAATAAAGTTAAGTCAAGAATGCGGACAGGAGAAAGCAATGTTGATCGCAAAGGTGGGAGTGGAGAAAGTCATCATTCTGATTATAGTTTCTCTGACTGTGTTCTTTCTGACCAGAGAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCGAGAGGTGATGTGCAGCCATCTCCATTTGGTGTATTTTCTCATGCTAAAGAGAAATCACATGGAAAAACTTTGAGAGACTCTGGTGATGAGGGTGAAGGAAAACCCATTCACAAGATCATAACTTCTAAAGCCGAAGCATGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGCAAATGATCGGGCAGAATCCGAGGCAGGGAATGTTCGTGTTGCTTGGCCTTGGTTGGAAAATGATCGAGAAAATGAGCCGGTTAATCAGAAGAATCTTTCTTTTGGGTTGAAGATGGAAAGCCAAGTGGCAGGTGAAAGTAATGGACCTGTTAATAATGAGGCCTTAGGATCCTGGTCTTCCTTTAATGTTAACAGCACAAGTAGTACCAGCAGCTGTGGGAGTGGTAGCAGTAGCGCTGTCAATAATAAAGTGGATGTTGATACGGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTCACAGTTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCTGTCAAGGTGTTCTCAAAGCAAGGATATTCAGATGATGTCATTCTGTCCTTCAGACAAGAGGTGTCTGTCTTGAAAAGACTTCGTCATCCAAATATTATTCTCTTTATGGGGGCAGTGACTTCACCTGAGCGTCTCTGCATTGTGACTGAGTTTCTCCCACGCGGAAGCTTGTTTCGTTTGCTTCAGAAGAACACATCCAAACTTGAATGGAGACGGCGCGTTCATATGGCTTTAGATATTGCACGAGGTGTGAATTATCTTCATCATTGCAGCCCCCCTATTGTCCATCGGGATTTAAAGTCTTCGAACCTTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCGCGCATTAAGCATGAAACATATCTCACAACTAAGACAGGAGAGGGCACGCCTCAATGGATGGCACCTGAAGTTCTGCGTAATGAACCCTCAGATGAGAAGTCTGACGTTTACAGCTTTGGAGTGATATTATGGGAACTTGCAACTGAAAAGATCCCTTGGGATAATCTCAATGCAATGCAGGTTGTTGGGGCTGTAGGTTTTATGAACCATCGGCTAGAAATTCCAGCAGATGTTGATCCACAGTGGGCTTCTATAATGGAGAGCTGCTGGCATAGTGATCCAGCTCAGCGACCAACATTCCAGGAACTGGTGGAAAGGCTTAGAGAGCTGCAGAGACGGTACAACATTCAGTTCCAGGCGGCCCGTTCTGCCGGCGGGGAAGGCAATCAAAAGGAGTCCTAG 2292 0.4503 MGSPETASQEEELVKKIERLEAGHAHLKQEMTKLKLSERRHHRHRSHSLSPQRSRLGGGGAASATTTCNKGSSCSPLKKESHSSHHHHQQQQHQNDGEVCVSARLNDKQYMNILQSMGHSLHVLDLQCHIIYWNPSAEKLYGYEAEEILGKDGIEMLVDPRDFSLANDVFNHVTMGESWTGQFPVKNKMGEKFIVVATITPFYDDDGKLVGVIYVSADLRPFLEIRVPFSNVKNAEPDSGSNRPKSSNSNKVGLDSQQPLQVALASKISNLASKVSNKVKSRMRTGESNVDRKGGSGESHHSDYSFSDCVLSDQREDGNSSGASTPRGDVQPSPFGVFSHAKEKSHGKTLRDSGDEGEGKPIHKIITSKAEAWIQKRTLSWPWRANDRAESEAGNVRVAWPWLENDRENEPVNQKNLSFGLKMESQVAGESNGPVNNEALGSWSSFNVNSTSSTSSCGSGSSSAVNNKVDVDTDCLDYEILWEDLTVGEQIGQGSCGTVYHALWYGSDVAVKVFSKQGYSDDVILSFRQEVSVLKRLRHPNIILFMGAVTSPERLCIVTEFLPRGSLFRLLQKNTSKLEWRRRVHMALDIARGVNYLHHCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRIKHETYLTTKTGEGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNAMQVVGAVGFMNHRLEIPADVDPQWASIMESCWHSDPAQRPTFQELVERLRELQRRYNIQFQAARSAGGEGNQKES* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1206 763 Pfam PAS fold 130 213 IPR013655 GO:0005515
Dod03g1206 763 ProSiteProfiles PAS repeat profile. 106 177 IPR000014 -
Dod03g1206 763 CDD STKc_MAP3K-like 491 737 - -
Dod03g1206 763 MobiDBLite consensus disorder prediction 34 97 - -
Dod03g1206 763 CDD PAS 123 219 IPR000014 -
Dod03g1206 763 MobiDBLite consensus disorder prediction 233 255 - -
Dod03g1206 763 ProSiteProfiles Protein kinase domain profile. 485 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1206 763 TIGRFAM sensory_box: PAS domain S-box protein 107 218 IPR000014 -
Dod03g1206 763 Gene3D Transferase(Phosphotransferase) domain 1 563 762 - -
Dod03g1206 763 PRINTS Tyrosine kinase catalytic domain signature 598 616 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 PRINTS Tyrosine kinase catalytic domain signature 664 686 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 PRINTS Tyrosine kinase catalytic domain signature 708 730 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 PRINTS Tyrosine kinase catalytic domain signature 645 655 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 PRINTS Tyrosine kinase catalytic domain signature 559 572 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 Gene3D Phosphorylase Kinase; domain 1 478 562 - -
Dod03g1206 763 MobiDBLite consensus disorder prediction 59 78 - -
Dod03g1206 763 Pfam Protein tyrosine and serine/threonine kinase 485 737 IPR001245 GO:0004672|GO:0006468
Dod03g1206 763 MobiDBLite consensus disorder prediction 300 328 - -
Dod03g1206 763 Gene3D PAS domain 119 220 - -
Dod03g1206 763 MobiDBLite consensus disorder prediction 275 361 - -
Dod03g1206 763 SMART serkin_6 485 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1206 763 SMART pas_2 108 175 IPR000014 -
Dod03g1206 763 MobiDBLite consensus disorder prediction 280 299 - -
Dod03g1206 763 SUPERFAMILY PYP-like sensor domain (PAS domain) 112 215 IPR035965 -
Dod03g1206 763 Coils Coil 10 37 - -
Dod03g1206 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Dod03g1206 763 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 31 761 - -
Dod03g1206 763 MobiDBLite consensus disorder prediction 234 255 - -
Dod03g1206 763 MobiDBLite consensus disorder prediction 341 361 - -
Dod03g1206 763 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 31 761 - -
Dod03g1206 763 SUPERFAMILY Protein kinase-like (PK-like) 471 737 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1206 Dod-Chr3 15090287 15096757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1206 11 754 MAP Kinase Kinase Kinase AT3G06620 57.612 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod03g1206 PK_Tyr_Ser-Thr 6.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1206 - - gmx:100800867 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1206 03 15090287 15096757 Dod03g1206 03 15090287 15096757 ECH
Dod05g2587 05 52151983 52158391 Dod03g1206 03 15090287 15096757 PCT