Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1203 ATGGCTTCTTCTTCTTCTTCTTCTTCTTATTCTTTGTCATCATCTTTGCATGCTTCAACATTCATAGTGGCAATTATCATTTTCATTTTGTTTTGCATGCCATATTGTGCCCTTGGCTTTGATGCAAAAACAGTTATAGACTCTCCTTTGTTAACCCAAAGGTTAGGAATCAATCGCACCATCAAAGTTGATATCAACGGCAATGGGGACTTTAAATCTGTTCAAGCTGCCATAAATTCCATTCCTGATGGAAATTCTAATTGGGTCATTGTCCATGTTAGGAAGGGAGTATACAGAGAAAAGGTGCACATACCAAAGACTAAGCGTTATATATTCATGAGAGGGAATGGGAAAGGAAAAACTGCTATAGTTTGGTCTCAAAGTTCTTCTGACAACATTGCTTCTGCTACATTCAAAGTCGAGGCCCCTGATTTCATTGCATTTGGAATTAGCTTCAAGAATGAGGCTCCTACGGGTATTGCCTATACCTCACAGAATCAATCGGTGGCTGCATTTGTGGCTGCAGACAAAGTGGCATTTTACCATTGCGCATTTTATAGTACTCATAACACTCTCTTTGATTACAAAGGCAGGCATTACTATGAGTCCTGCTACATTCAAGGCTCAATTGATTTCATATTTGGTCGTGGCAGATCCATCTTCCAGAGTTGTGAGATATTTGTGATCGATGACAAGAGGATAAAAATTCACGGGTCAATCACAGCCCAAAATAGGGAAAGTGAACGTGAGATTAGTGGATTTATATTCATCAAATGCAGGGTTTATGGCATTGGTGGGGTGTACCTAGGAAGGGCTAAAGGTCCTTATTCTAGGGCCATTTTTGCCAAGTCGTATCTCTCCAAGACAATTGTCCCAGAGGGATGGACCAATTGGAGCTATGATGGTAGCACAGAAAACCTATTCCATGCTGAGTACAAGTGCTATGGGCCTGGAGCAACTACAGAAGGACGAGCTCCATGGTCAAGGCAACTTACTGACCAAGAAGTTGCTCCATTCTTGTCTATTGATTACATTGATGGCAAGAATTGGTTGCCAGCATTTCATTAA 1068 0.4101 MASSSSSSSYSLSSSLHASTFIVAIIIFILFCMPYCALGFDAKTVIDSPLLTQRLGINRTIKVDINGNGDFKSVQAAINSIPDGNSNWVIVHVRKGVYREKVHIPKTKRYIFMRGNGKGKTAIVWSQSSSDNIASATFKVEAPDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFQSCEIFVIDDKRIKIHGSITAQNRESEREISGFIFIKCRVYGIGGVYLGRAKGPYSRAIFAKSYLSKTIVPEGWTNWSYDGSTENLFHAEYKCYGPGATTEGRAPWSRQLTDQEVAPFLSIDYIDGKNWLPAFH* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1203 355 PANTHER PECTINESTERASE 67-RELATED 20 354 - -
Dod03g1203 355 ProSitePatterns Pectinesterase signature 2. 206 215 IPR033131 -
Dod03g1203 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 354 - -
Dod03g1203 355 Pfam Pectinesterase 62 347 IPR000070 GO:0030599|GO:0042545
Dod03g1203 355 Gene3D - 55 355 IPR012334 -
Dod03g1203 355 SUPERFAMILY Pectin lyase-like 57 353 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1203 Dod-Chr3 15075816 15077917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1203 58 351 Carbohydrate Esterase AT5G47500 38.816 3.16e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1203 - - mtr:MTR_2g033970 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1203 03 15075816 15077917 Dod03g1203 03 15075816 15077917 ECH