Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1201 ATGATGAATCTTCTCTCTCTCTGTTGGAAGCCCTTCGCCCACGGCGGCGGTGACGGCGTCGCCGGGCGGGAGGGCAAGGACGGGCTTCTCTGGTTCCGCGACATCGGAAGATACGGCTCCGGCGAATTCTCCATGGCGGTGGTGCAGGCCAACCAGGTCCTTGAAGACCAGAGCCAGATCGAGTCCGGTTCCCTCGGCACCTTCGTTGGCGTCTACGACGGCCACGGCGGCCCGGACGCCTCACGCTACGTCTGCGATCACTTGTTCCCCAATTTCCAAGCTGTATCAGGTGAGTCACAAGGGGTTGTGACGGCTCAGACTATTCAAACTGCGTTCCGCCGGACGGAGGAGGGGTTCACTTCCCTTGTTTCGCAGCTGTGGAGTACTCGGCCTCAGATTGCCACTACCGGGACTTGTTGTCTGGTTGGTGTGATCTTTGAGCAGACGCTCTTCGTGGCGAGTCTTGGAGATTCCCGTGTTGTGTTGGGCAAGAAAGTCGGCAACACTGGTGGGATTGCGGCGATTCAGCTGTCTACGGAGCACAATGCGAATGTTGAGGCCGTTAGGCAGGAGCTTAAAGAATTGCACCCTGATGATCCCCAAATTGTTGTCCTGAAACACGGAGTTTGGAGAGTCAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTATAACCAGGAACCAATTAATCCCAGATTCAGACTTCCTGAGCCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTTCACAACAATCCACATGCGGGTAGTGCCAAGAGGCTAGTGAAGGCTGCACTACATGAAGCAGCAAGAAAACGTGAAATGCGGTACTCGGACCTGCGTAAGATAGACAAGAAGGTCCGGCGGCATTTTCACGATGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCACAGTCCTAAATCCCCCACTCTCTATTCGCAGCGCCCTTGATCACTGA 1101 0.5132 MMNLLSLCWKPFAHGGGDGVAGREGKDGLLWFRDIGRYGSGEFSMAVVQANQVLEDQSQIESGSLGTFVGVYDGHGGPDASRYVCDHLFPNFQAVSGESQGVVTAQTIQTAFRRTEEGFTSLVSQLWSTRPQIATTGTCCLVGVIFEQTLFVASLGDSRVVLGKKVGNTGGIAAIQLSTEHNANVEAVRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQYNQEPINPRFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHNNPHAGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLNPPLSIRSALDH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1201 366 ProSiteProfiles PPM-type phosphatase domain profile. 39 343 IPR001932 -
Dod03g1201 366 SMART PP2C_4 29 341 IPR001932 -
Dod03g1201 366 Gene3D - 34 351 IPR036457 -
Dod03g1201 366 Pfam Protein phosphatase 2C 61 314 IPR001932 -
Dod03g1201 366 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Dod03g1201 366 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 1 366 - -
Dod03g1201 366 CDD PP2Cc 43 343 IPR001932 -
Dod03g1201 366 SUPERFAMILY PP2C-like 51 344 IPR036457 -
Dod03g1201 366 PANTHER ALPHABET, ISOFORM E-RELATED 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1201 Dod-Chr3 15050594 15055724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1201 1 296 PP2C-type Phosphatase Gene Family AT3G17090 69.156 1.72e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1201 K01102 - gmx:100811922 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1201 03 15050594 15055724 Dod03g1201 03 15050594 15055724 ECH
Dod05g2580 05 52092323 52097003 Dod03g1201 03 15050594 15055724 PCT