Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1199 ATGGCCTCATCTCTGATCTCAACTCCACCACCACCCTCCACCCCCACCACACCCACCACCCTCACCTTCACAGACCGATCACGTGACTCGCACGTGCAGAAGAAAAAGAAGAAACTCCACTCCAAGCATCACCACCACCACCACCAAAATCAACAACACAACCAAATCAAATGGAAAACACAGGCGCAGCAGAACCTCTACTCCTCCAAGCTTCGCCAGGCCCTCGCCGGAGCCAACCTCTCCGGCGGGAAGTCAGTCCGAGAAACCGCCGACAGGGTGCTCGCCACCGCCGCAAGGGGAAAGACACGCTGGAGCCGAGCAATACTAACGAACCGGCTCAAACTCAAGTTCAGAAAAAAGAACAAGAACAAGAGACAGAGACTAATGATGTCGGCATCATCATCATCGACTCCGGTCCGGTCCAGGAAAACCCGGTTCAGCGTGTTGGGTTTGAAGGGCAGGAAGACCGCTCCGGTGGTTCAGAGGAAAGCGAGGGTTCTGGGAAGGTTGGTTCCCGGTTGCGGAAAGGAACCGTTGCCGGTGATTCTAGAAGAAGCTATTGATTACATACCTGCGCTTGAGATGCAGGTTCGAGCCATGACAGCGCTCGCGAACTTGTTCTTAGGTTCTTCTTCTTCTTCTTCTTCTTCCGGCGCCGGTGGTGGTGCTCCGGCAAGTTGA 681 0.5477 MASSLISTPPPPSTPTTPTTLTFTDRSRDSHVQKKKKKLHSKHHHHHHQNQQHNQIKWKTQAQQNLYSSKLRQALAGANLSGGKSVRETADRVLATAARGKTRWSRAILTNRLKLKFRKKNKNKRQRLMMSASSSSTPVRSRKTRFSVLGLKGRKTAPVVQRKARVLGRLVPGCGKEPLPVILEEAIDYIPALEMQVRAMTALANLFLGSSSSSSSSGAGGGAPAS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1199 226 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 31 219 IPR044660 GO:0006355
Dod03g1199 226 MobiDBLite consensus disorder prediction 1 57 - -
Dod03g1199 226 MobiDBLite consensus disorder prediction 121 143 - -
Dod03g1199 226 MobiDBLite consensus disorder prediction 31 53 - -
Dod03g1199 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 201 IPR036638 GO:0046983
Dod03g1199 226 MobiDBLite consensus disorder prediction 127 143 - -
Dod03g1199 226 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 31 219 - -
Dod03g1199 226 CDD bHLH_AtIBH1_like 152 204 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1199 Dod-Chr3 15003420 15006110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1199 57 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.479 7.11e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1199 - - adu:107483409 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1199 03 15003420 15006110 Dod03g1199 03 15003420 15006110 ECH