Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1198 ATGGAGGAGAAGGCACCACCACCTTTGTTACCACCACCACCACAACCACCTCACCCCATCAATGACCCTTCTTCGTCATCACCACCACTGTTACCACCGCCACTACCACCTCACCCCGTCAATGACCCTTCTTCATCATCACCACCACCACCACTACCACCATCATCATCCACACCCATCAACAACACCAACACCACCATGGATTCTTGTGACGATTTTTCCAACATCTTTAGCGAAGAATTCAACAGCTTGAATCTCCCTTTTCAACCAGACACCTTGTCCTCCATCTTTGACCTGCTATCTAAAGACTCGTTTGATGTCAGCGACTTAGGTCCTTCCCTGACTGAATGGTTATCTATAGATGACGACGACAATGAAAATGAAAATCAAAACGACGTGGTCGTCGCCGCCACCACAGCAGCCGATGACACTCCGGTGAGCCACCCTCGGCCATCACCACCACTGAGCTCTAGCGTTCCAGAATCTTCTGAAGCAGCGTCACCGAACTCTGTCTCTATTTCGTCATCCTCCAACGGACCCGCCATTAACGTTAATAGCGACGTTATAGTAACAACACAGCTGGGTGGTGATGAAACAGCTGGGGACAAACGTGAAGCAGCATGCTTGGATGGTGATGCAATTATGACTGTGGGTGGGGGTGGAGATGGAACCAGAGAAGCTGATGATGAAGACAAAAATATATTAAACAGTGTGAATTATGAGGCGAAGAGGATCCGAAGGAAGACCAGTGAAATGAGGTTTGCATTCGTTACAGAGAGCGAAGTGGATAACCTGGACGATGGCTTCCGATGGCGCAAGTACGGCCAAAAGATTGTCAAAGACAGCCCTCACCCTAGGAGCTACTATCGCTGCACCTACATTGGTTGTGCTGTGAAGAAGCGAGTGGAGCGTTGCCCCGAAGACGCTTCCCGTGTTCTGACAACCTACGAGGGCCAACACAATCACCCTTTGCCCCCTCCCCACGGTACGCGTGGTGGCAACCGCTACAGAAACAACAACAACAATAACAATAACAATAACAGTGCATGTGCATGTGCAAGTGCAAGCATAAGTACAAAAGCAAGTGATGGCAGTATTGGCGGTGGAGTTGGAAGTGGAGGTGGCAGAGTAATTACTGGTAGTGCTAAGGTTGCAGCTAAGGGTGGTGCTGGTACCAGTGCTGATGCTGGTGCTACTGGAAGTGTTAATGGTCGTGGTGGTTTTGGTTACAGTTTAATTGGTAGTGCTGGTGGTGGTAACTACAGTGGTTTAAATGGTGGTGGTGGTCTTGGCGGTGCAACTTATCAGGGTGTTAATAATAGTGCCGGTGGTGGTGGTGCAAGTTACAGTGGTTTAAGTGGTGGTCATGGTGGTGCTACTTATCAGAGTGTTAATAATAATGCTGGTGGTGGTGGTGGCGGTGGCGGTGATGGCTTTAGCTTTGGTATTGGTTTTGGTTTTGGTCTTGGTGGTAGTGGTGATAGCTTTGGTTTGCACCGCATTATGCAGCCACCGGTTAATTGGCAGCCACCAATGCAGCTTAACAACCGCCAGCAACAACAGCTGCAGCAGAATATTAATGTGCAACAAGCATCAGCACCTTTGTTTTACAGTTACAGAAACCCCATAATACGACCTCCCTTGAGTGTTGTTAGCTGTCTTGGCAATGCTAATCACATGATGAACCTATCTTTGATTAGTAGTGAAGTTCCAGCTGATCGTGATGTTCGTGGAGGTTTCGGATTTGGACCACCACCACCACCGTCAAATCCACCATCTCATGGTGAGGATTTGTTGAAGGACACCGGGCTGCTTGAGGACATTGTTATGTTGCCAATGCGGATGAAGATGGTAGGAAACGGAAACAACTGA 1872 0.4866 MEEKAPPPLLPPPPQPPHPINDPSSSSPPLLPPPLPPHPVNDPSSSSPPPPLPPSSSTPINNTNTTMDSCDDFSNIFSEEFNSLNLPFQPDTLSSIFDLLSKDSFDVSDLGPSLTEWLSIDDDDNENENQNDVVVAATTAADDTPVSHPRPSPPLSSSVPESSEAASPNSVSISSSSNGPAINVNSDVIVTTQLGGDETAGDKREAACLDGDAIMTVGGGGDGTREADDEDKNILNSVNYEAKRIRRKTSEMRFAFVTESEVDNLDDGFRWRKYGQKIVKDSPHPRSYYRCTYIGCAVKKRVERCPEDASRVLTTYEGQHNHPLPPPHGTRGGNRYRNNNNNNNNNNSACACASASISTKASDGSIGGGVGSGGGRVITGSAKVAAKGGAGTSADAGATGSVNGRGGFGYSLIGSAGGGNYSGLNGGGGLGGATYQGVNNSAGGGGASYSGLSGGHGGATYQSVNNNAGGGGGGGGDGFSFGIGFGFGLGGSGDSFGLHRIMQPPVNWQPPMQLNNRQQQQLQQNINVQQASAPLFYSYRNPIIRPPLSVVSCLGNANHMMNLSLISSEVPADRDVRGGFGFGPPPPPSNPPSHGEDLLKDTGLLEDIVMLPMRMKMVGNGNN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1198 623 Pfam WRKY DNA -binding domain 266 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1198 623 MobiDBLite consensus disorder prediction 1 57 - -
Dod03g1198 623 MobiDBLite consensus disorder prediction 140 178 - -
Dod03g1198 623 SMART WRKY_cls 265 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1198 623 ProSiteProfiles WRKY domain profile. 260 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1198 623 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 108 343 - -
Dod03g1198 623 Gene3D WRKY domain 250 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1198 623 MobiDBLite consensus disorder prediction 576 599 - -
Dod03g1198 623 MobiDBLite consensus disorder prediction 1 68 - -
Dod03g1198 623 SUPERFAMILY WRKY DNA-binding domain 258 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1198 623 MobiDBLite consensus disorder prediction 157 178 - -
Dod03g1198 623 MobiDBLite consensus disorder prediction 316 342 - -
Dod03g1198 623 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 343 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1198 Dod-Chr3 14957736 14960714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1198 152 325 WRKY Transcription Factor Family AT4G18170 43.182 1.03e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g1198 WRKY 9.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1198 - - gmx:100127422 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1198 03 14957736 14960714 Dod03g1198 03 14957736 14960714 ECH
Dod03g1198 03 14957736 14960714 Dod05g2572 05 51980161 51983695 PCT