Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1191 ATGTTGTCTGGTGAAGTTCCAAACAGCTTGTTGGATTGCAAGAAGCTGAGATCTCTAGCGCTGTCTCATAGTAGCTTCACTGGAAGCATACCACGATGGATAGGGAACTTGACCCGGCTCAAAGAAATCTATCTTGCCTTTAACAGCTTTGGAGGTTCAATACCATATGAGATTGGCAATCTACATAATCTAGAGGTCTTGACTCTTCATTTCAACAACCTCAGTGGCAACATTCCACCAACAATCTTTAATTTTTCTTCCATAAAGGTGATTTCTGCTACAGGAAAGAGTCTTTCAGAGCTTGTATTCATTAACCATAGAAAGAACACGTTCTCTGGCCCCATACCATCTTGCTTAAGTAATCTCACATCATTGAGAAAGATTTCAATTTCTTCAAATTCGTTCACCTCAATACCTTCCACGCTGTGGGGTCTAACAGGAAATCAATTTTCTGGTAGCATCCCAAGTAGTATTGGAAATCTTGAGCTTTTGGTTCACCTCTCCTTGGCAAGAAATGAATTTGAAGGACTTATTCCAGAATCTTTTGGTCATATTGTAAGTTTGGAACTTCTTGACTTATCAGAAAACAACTTGTCCGGTGTTATTCCTGAGTCATTGGAGTCACTTGTGCATCTGAAATATTTCAATGTGTCATCGAATAAGCTAAAAGGAGAAATTCCAAATGGGGGACCTTTTGTAAACTTCTCTGCTCAGTCATTCATGGGGAATGAAGGACTATGTGGTGCTCCACATTTGCAATTCCCAGAATGCAATAAGGGGAGCTTTGGAAAAGTATATAAAGGAGTACTCTCAGATGGGATGAATGTTGCAATAAAAGTCTTCAATTTGGGATTGGAAGAAGAGGCATTCAAGAGTTTTGATACTGAATGTGAAGTATTGTGCAATGTTCGCCATCGAAACTTGACCAAAATCATTAGTAGTTGCAGCAACATTGACTTCAAGGCATTGGTTATCAGCTACATGTCAAATGGAAGTTTGGAGAAGTAG 1008 0.3938 MLSGEVPNSLLDCKKLRSLALSHSSFTGSIPRWIGNLTRLKEIYLAFNSFGGSIPYEIGNLHNLEVLTLHFNNLSGNIPPTIFNFSSIKVISATGKSLSELVFINHRKNTFSGPIPSCLSNLTSLRKISISSNSFTSIPSTLWGLTGNQFSGSIPSSIGNLELLVHLSLARNEFEGLIPESFGHIVSLELLDLSENNLSGVIPESLESLVHLKYFNVSSNKLKGEIPNGGPFVNFSAQSFMGNEGLCGAPHLQFPECNKGSFGKVYKGVLSDGMNVAIKVFNLGLEEEAFKSFDTECEVLCNVRHRNLTKIISSCSNIDFKALVISYMSNGSLEK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1191 335 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Dod03g1191 335 Pfam Leucine rich repeat 15 74 IPR001611 GO:0005515
Dod03g1191 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 259 - -
Dod03g1191 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 259 335 - -
Dod03g1191 335 ProSiteProfiles Protein kinase domain profile. 251 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1191 335 Pfam Protein tyrosine and serine/threonine kinase 259 334 IPR001245 GO:0004672|GO:0006468
Dod03g1191 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 100 - -
Dod03g1191 335 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 259 335 - -
Dod03g1191 335 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 146 259 - -
Dod03g1191 335 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 9 100 - -
Dod03g1191 335 SMART LRR_typ_2 122 145 IPR003591 -
Dod03g1191 335 SMART LRR_typ_2 161 184 IPR003591 -
Dod03g1191 335 SMART LRR_typ_2 61 85 IPR003591 -
Dod03g1191 335 SMART LRR_typ_2 185 208 IPR003591 -
Dod03g1191 335 SUPERFAMILY Protein kinase-like (PK-like) 258 334 IPR011009 -
Dod03g1191 335 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 97 146 - -
Dod03g1191 335 Gene3D Phosphorylase Kinase; domain 1 259 329 - -
Dod03g1191 335 SUPERFAMILY L domain-like 3 252 - -
Dod03g1191 335 Gene3D Ribonuclease Inhibitor 1 258 IPR032675 -
Dod03g1191 335 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 97 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1191 Dod-Chr3 14895083 14897563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1191 261 335 Receptor kinase-like Gene Family AT5G46330 44.156 6.72e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dod03g1191 PK_Tyr_Ser-Thr 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1191 - - csin:114273985 277.715