Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1184 ATGCAGACCCAAATCTCCCACTCCCATTTCAACAAGGGTGACCCCGTAGAGGCCACACACCCCAACCACCCCGACCACCGGTTCTACCCGGCGTCCGTTCTCCGCGCCCCCGACATGCGCAACAACCTCGTCCTCCTAGAGTACCACACTCTCTTCTCCCCTTCTGACTCTGACTCTGACCCACACCCTCATCCCAAGCGCCTCCGTCACCACCTCCACGTGGATTCCGTGAGGCCCAAGCTTCCCGACCAGCTCAACCCCTGGTTCAAGGTCGGCGACTCCGTCGACGCATACCGCAAAACCGACGACGGCGAAGGAGGAGAGGCATGGTGCCCTGGTGTCGTCGCCGACATTCTGGAGCATTCGAGGTATGCGGTGTCGTTCCATGAGGAGGGTCGTGCCGTCGTGGAACAGTGTAGGCTGCGCCTTCACCGTGACTGGGTTGATGGGAATTGGGTCCCACCTCTCCCTCAAAAGGAGCAGCAACCTGAGACTGTGATGAAGCCTGAAAATTTCAGGTTTAAGATCAAATACAGCAGGAAACGACTACAGGGATTGATGTTTGAAAAAGGGATAATAGTAGAAGTCAGCAACAATGATGAAGGTTATAAGGGTGCTTGGTTTATTGCTACTATTGTTGACTTAACAGGAAAAGACAGGTATCTAGTGGAGTATAGGGACCTGATAGCAGATGATGAAAGTCAGCTCTTGAAAGAAGAAGTTGATGCAAGGTTTATTAGGCCCTGCCCTCCAGAAGTTACATTTGTTGGTTCTTTCAAACAGTTCCAAGAGGTTGATGTATGGTATAATGATGGGTGGTGGGAAGGCGTGGTTCTTGAAGTAGTAAATAGCGGAGAGTGTTCTGTTTCTTTTATTAACAATGAGGTATTGAAATTTGAAAATTCTAAACTAAGGCCTCATCAGGACTGGTTTGACGGAAAATGGGTCGTGTCTTCCAAGAAGCCAAGGGAGCTGGAAAAGAAGTTTGGAGATGTGATGTCAAAAGCCAAGAATCTCACTGGAAACAAATTAATCTTGAAACATCTAAAGTCTAGGGAGATTGCAGAGAAGCCTAGATATGTAACAACAAGGACCAAGGAAACCAGAAGCAAACCTGTGCCGCATTTTGGTAAAGGGGCAAAGGTAGAAGTCAGAAGTGATGAAGAAGGTTACCAAGGAGCCTGGTATACTGCCATTGTTGTTGACTCTCTGCAGAATGGCAAGTGCTTGGTGGAGTATTTGACCCTGAAAACAGATGACTTATCCGAACAACTGAAAGAAGAAGCAGACGCTACAGATATCAGGCCATTTCCACCAGATATCGATAATTGTGACCGCTTTGCACTGCGTCAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGTCAGGTATCCAGTGTACTTTGTGGCTTCAAGTATAGGGTTTACTTTTGGCCTACAAAGGAGGAGCTGGAATTTGAACATTGTCATCTGAGGCCTCATCAAGAATGGATTGATGGAAGATGGGTACATGCTTCTTTGGGCTGGAGACCATGA 1542 0.4799 MQTQISHSHFNKGDPVEATHPNHPDHRFYPASVLRAPDMRNNLVLLEYHTLFSPSDSDSDPHPHPKRLRHHLHVDSVRPKLPDQLNPWFKVGDSVDAYRKTDDGEGGEAWCPGVVADILEHSRYAVSFHEEGRAVVEQCRLRLHRDWVDGNWVPPLPQKEQQPETVMKPENFRFKIKYSRKRLQGLMFEKGIIVEVSNNDEGYKGAWFIATIVDLTGKDRYLVEYRDLIADDESQLLKEEVDARFIRPCPPEVTFVGSFKQFQEVDVWYNDGWWEGVVLEVVNSGECSVSFINNEVLKFENSKLRPHQDWFDGKWVVSSKKPRELEKKFGDVMSKAKNLTGNKLILKHLKSREIAEKPRYVTTRTKETRSKPVPHFGKGAKVEVRSDEEGYQGAWYTAIVVDSLQNGKCLVEYLTLKTDDLSEQLKEEADATDIRPFPPDIDNCDRFALRQWVDAWYNDGWWVGQVSSVLCGFKYRVYFWPTKEELEFEHCHLRPHQEWIDGRWVHASLGWRP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1184 513 MobiDBLite consensus disorder prediction 1 25 - -
Dod03g1184 513 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 136 508 - -
Dod03g1184 513 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 243 - -
Dod03g1184 513 Pfam Agenet domain 194 251 IPR008395 -
Dod03g1184 513 Pfam Agenet domain 379 439 IPR008395 -
Dod03g1184 513 Gene3D - 364 443 - -
Dod03g1184 513 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 136 508 - -
Dod03g1184 513 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 7 243 - -
Dod03g1184 513 SMART agenet_At_2 186 254 IPR014002 -
Dod03g1184 513 SMART agenet_At_2 445 501 IPR014002 -
Dod03g1184 513 SMART agenet_At_2 257 312 IPR014002 -
Dod03g1184 513 SMART agenet_At_2 87 149 IPR014002 -
Dod03g1184 513 SMART agenet_At_2 374 442 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1184 Dod-Chr3 14841701 14848236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1184 385 499 PHD Transcription Factor Family AT5G58610 30.370 4.74e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1184 - - adu:107483399 657.907