Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1174 ATGATGATTGTGAGCCAGAAGATGGTGGCGGAAGCTGAAATCATGTGTAAGCAGAGCATTCCGGTGTTGGATGTGAAGTGTCGCGTTTGCGTAGCGCAAGAACAGAGCGTCAAGGTTGATGTTTCACCCACAGCCAACGCTGTTCCGATCTTCAGCCAAGTTAGGGTCTCGCCCGAATCGATTTACACCGAAACTTCTCTCTTTGGATCGGCTGTGAGTTGCGCTGAGGTAATTGAAGATTCTGTTATGGAGGCTCCTGTTACCGTATTTATTCCGAATGTTCGTTCTGGTAGCTGTGCTGATATTGGACCCAGGGGATCTATGGATGATGAACACATTCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTCAAGTGCCCTGTACCAAGCGCATTTTATGCAGTTTTTGACGGGCATGGAGGGCCTGATGCAGCTGCTTTTGTCAAGAGGAATGCAATGAGACTATTTTTTGAAGACGCCGATATGCTGCAATCTTATGATACTGATGCCCTTTTTCTAAAGAGGTTGGAGGATTCTCATAGAAGAGCTTTCTTAGGGGCAGACCAAGCGTTGGCTGATGAAGAAACTGTCAGCAGTTCTTGCGGGACCACAGCCTTGACTGCCCTTATACTTGGAAAGCATTTGCTGGTCGCTAATGCTGGTGATTGTAGAGCCGTTCTTTGCAAGCGGGGGGTAGCGGTTGAGATGTCTCATGATCATAGACCGAGCTATTTACCAGAACGGAAGAGAGTTGTGGAGTTAGGCAGTGTCATTGATGATGGGTATCTCAATGGCGATCTTTCTGTCACTCGTGCCCTTGGGGATTGGTACTTAAAGCTTGGTTCTGCATCGCCTCTTATTGCTGAGCCCGATGTTCAGGTGGTTACATTGACGGAAGAGGATGAGTTCTTAATCATTGCGTGCGATGGGATCTGGGATGTAATGTCGAGCCAGGAAGCTGTTAGTTTTGCGCGCCGAAGATTGAGATGGCATGATGACCCACAGCAATGTGCCAGGGAACTGGTTAAGGAAGCATTGCGCCTACATACATCAGATAATCTTACTGTGATTGTTATATGCTTGTCCTCAGTGGAAAGGATTGTTGAATCATGCCCACCCCATAGGCGGAGATTCAGAGCTTGTTCACTGTCTGAAGAGGCCCAAAATAGATAG 1179 0.4741 MMIVSQKMVAEAEIMCKQSIPVLDVKCRVCVAQEQSVKVDVSPTANAVPIFSQVRVSPESIYTETSLFGSAVSCAEVIEDSVMEAPVTVFIPNVRSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFKCPVPSAFYAVFDGHGGPDAAAFVKRNAMRLFFEDADMLQSYDTDALFLKRLEDSHRRAFLGADQALADEETVSSSCGTTALTALILGKHLLVANAGDCRAVLCKRGVAVEMSHDHRPSYLPERKRVVELGSVIDDGYLNGDLSVTRALGDWYLKLGSASPLIAEPDVQVVTLTEEDEFLIIACDGIWDVMSSQEAVSFARRRLRWHDDPQQCARELVKEALRLHTSDNLTVIVICLSSVERIVESCPPHRRRFRACSLSEEAQNR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1174 392 CDD PP2Cc 94 363 IPR001932 -
Dod03g1174 392 SUPERFAMILY PP2C-like 88 365 IPR036457 -
Dod03g1174 392 SMART PP2C_SIG_2 110 363 IPR001932 -
Dod03g1174 392 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 53 384 - -
Dod03g1174 392 PANTHER PROTEIN PHOSPHATASE 2C 8 59 IPR015655 GO:0004722|GO:0006470
Dod03g1174 392 Pfam Protein phosphatase 2C 103 355 IPR001932 -
Dod03g1174 392 ProSiteProfiles PPM-type phosphatase domain profile. 95 363 IPR001932 -
Dod03g1174 392 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 8 59 - -
Dod03g1174 392 SMART PP2C_4 85 361 IPR001932 -
Dod03g1174 392 PANTHER PROTEIN PHOSPHATASE 2C 53 384 IPR015655 GO:0004722|GO:0006470
Dod03g1174 392 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Dod03g1174 392 Gene3D - 86 369 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1174 Dod-Chr3 14577055 14580213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1174 2 392 PP2C-type Phosphatase Gene Family AT1G48040 56.328 6.72e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1174 K14803 - gmx:100798957 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2537 05 51630429 51630680 Dod03g1174 03 14577055 14580213 PCT