Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1162 ATGTGCAGCATCTTTGAGCCAATCATGGAGAATTACCAAGGTGATTTAGCTGACATACTCCGTGCTAGTAGTGCTAGACCAGCAGCATATGGCAGCACCACTTCTTCATCATCTGAACCTGCATCAGCATCTGCATCACATAATGATCAATATCAATATCATCACTGGCAGCAACAACAACAAGAAGAGCACCATTTCTCTTCTGACCCCATGAGTGGTGGTTTCTCTTCTTCTGTTCTTGAAGACCCCATCATCAGAAGCACCACCACGAACAACAACACCACCTTTGGTGATCCATTCTCAACCCTGAGAGACCCTTTCCTTCATGAGCTTGACATCCCTCCACCCTACTTCAACACCTCAACTACTTCTTCTTCGGGGGGCTTGGAAGAAGCAGCTGCTAGTTTTGTTGCTGCTGCTCCTGCTGGTGGTGTTGGCAACACTAGAAACACTCCTCCTCCTTCTGTTTATGCACATCATCATCATCACAACAATAGTAAGGTTCTTGAAGATCAGCATCATGACATGAGATCATCAAAAATTAGGCCTTGCAAGAACATATTCTCAAACATGATTCAGATCTCCCCCAATAATGCAAAGTTACCCCTACCCTATGATTCTTCTTCTTCTTCACCGGCCATGGCGGCTTCCCCAAGAGCAATTAAGCCTTCTGCCGTGGTCTCACCCAGTACCTCCTCCAAGGATTGCCTTGTGGTGGACAACACATCAGTGCAGATCTCATCTCCACGGAATCCGGGTCTCAAGCGCAGGAAGAACCAGGCTAAAAAGGTGGTTTGCATTCCAGCACCAGCGGCTGCAAACAGCAGACAAACTGGAGAGGTAGTCCCTTCAGATTTGTGGGCTTGGAGAAAATACGGTCAGAAACCCATCAAAGGTTCACCTTATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTTCTGCAAGAAAACAAGTCGAGAGGAGCAGGACAGACCCAAACATGTTGGTTATTACCTACACTTCAGAGCACAATCATCCATGGCCAACTCAAAGGAATGCTTTGGCAGGTTCAACAAGGTCTCAGCCATCAAAGAACAATGCTGCTAATTCAAAGAATAGTTCAGAAACCTCTCAGTCCCAAAAGGGTACCACAACAAATAAGCCAAAGGAGGAGCAGCAGCAAGAGATGAGCAACAACAGTGAAGGCAATATGTCCCCAGTTATTAATGCTGGGAACTCATCAGCAAACAGTGCATCAGTGAAGGAAGAGATGGAGGACATAGAGAAGCAGCTTGAGAGCATGGATGATGCAGAATTCAGTGATGGACTACCTAATTATAAGCCATCAATGATGGATCATCAGGGTAACAATAACTCTGAGGACTTCTTTGCAGAATTGGGAGAAATTGAAGCTGACCCTTTAGACCTATTGTTTAGTCAAGGTTTTAATGCAGGTGGTGATGATCAAAGGGAATCCAAGGCCTTAGATCCATTCAATATATTTGACTGGTCAGGAGACACCAACACCAACTCCTTCGAAGAACATAATAATAAGGGAAGGCTATAA 1554 0.453 MCSIFEPIMENYQGDLADILRASSARPAAYGSTTSSSSEPASASASHNDQYQYHHWQQQQQEEHHFSSDPMSGGFSSSVLEDPIIRSTTTNNNTTFGDPFSTLRDPFLHELDIPPPYFNTSTTSSSGGLEEAAASFVAAAPAGGVGNTRNTPPPSVYAHHHHHNNSKVLEDQHHDMRSSKIRPCKNIFSNMIQISPNNAKLPLPYDSSSSSPAMAASPRAIKPSAVVSPSTSSKDCLVVDNTSVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNAANSKNSSETSQSQKGTTTNKPKEEQQQEMSNNSEGNMSPVINAGNSSANSASVKEEMEDIEKQLESMDDAEFSDGLPNYKPSMMDHQGNNNSEDFFAELGEIEADPLDLLFSQGFNAGGDDQRESKALDPFNIFDWSGDTNTNSFEEHNNKGRL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1162 517 MobiDBLite consensus disorder prediction 308 424 - -
Dod03g1162 517 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1162 517 Coils Coil 413 433 - -
Dod03g1162 517 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 502 - -
Dod03g1162 517 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 502 IPR044810 GO:0003700
Dod03g1162 517 MobiDBLite consensus disorder prediction 327 416 - -
Dod03g1162 517 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1162 517 SUPERFAMILY WRKY DNA-binding domain 281 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1162 517 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1162 517 Gene3D WRKY domain 257 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1162 517 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1162 Dod-Chr3 14444875 14447658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1162 1 514 WRKY Transcription Factor Family AT1G30650 39.347 2.59e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g1162 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1162 - - aprc:113852911 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1162 03 14444875 14447658 Dod03g1162 03 14444875 14447658 ECH