Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1152 ATGGTCACGTTGCTTGTTCTGCCTGCTGCATCGATCTCAGGAAGAAGTGTGCCACATGCTCCTTGGCCCATCGGCTACAACCGTTGCAGAGCCCTTGAGAAAGTGCTGGAATCTGTTAAAATACCGTGCCCTAATGCAGATTACGGTTGCAAGGATACATTGAGTTACAATGAGAAGAAAAACCATATGCTTGACTGCACCTATGTACCATGTTCTTGCCCACATTCAGATTGTGACTTTGTTGGCTCATCCAAGGACTTAGCCGTCCACTTCATGGATGAACATGATCCAGGAGAGAGTTTTTTATATGGCGGCACTTTCTCTGTCGCATTAAAATCTGATGATAATGAAGATGAGGTCATTATCCTTCAAGAGAAGACTCATGGCAACTTGTCTATTCTCCAGCAATAA 411 0.4428 MVTLLVLPAASISGRSVPHAPWPIGYNRCRALEKVLESVKIPCPNADYGCKDTLSYNEKKNHMLDCTYVPCSCPHSDCDFVGSSKDLAVHFMDEHDPGESFLYGGTFSVALKSDDNEDEVIILQEKTHGNLSILQQ* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1152 136 Pfam Seven in absentia protein family 28 101 IPR018121 GO:0005737|GO:0006511|GO:0007275
Dod03g1152 136 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 15 135 IPR044286 -
Dod03g1152 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 91 IPR013083 -
Dod03g1152 136 ProSiteProfiles Zinc finger SIAH-type profile. 38 96 IPR013010 GO:0008270
Dod03g1152 136 SUPERFAMILY TRAF domain-like 38 113 - -
Dod03g1152 136 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 15 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1152 Dod-Chr3 14370669 14371079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1152 16 95 C3H Transcription Factor Family AT2G41980 36.585 2.49e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1152 K04506 - gmx:100778869 130.183