Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1151 ATGTGTGGTAATGGTCATGTTGCTTGCTCTGCCTGCTGCATCAAAATCGAGAAGAAGTGTGCCACATGCTCCTTGTCCATTGGCTCCAACCGTTGCAGAGCCCTTGAGAAGGTTCTGGAATCTGCTAAAATGACATGCCCTAACGCAGAACATGGCTGCAAGGAGATATTTAGTTTCAGTGAGAAGAAAAAAAACACAAGCTTGACTGCACCTATGTACCATGTTCTTGTCCACATCCAGGTTGTTGCTTTGTTGCCTCATCCAAGGAGTTATCCCTCCACTTCAAGAACGAATATGGTCCAGGAGAGAGTTTCATGTATGATTGCCATTTCTCTGTCACATTAA 345 0.4464 MCGNGHVACSACCIKIEKKCATCSLSIGSNRCRALEKVLESAKMTCPNAEHGCKEIFSFSEKKKNTSLTAPMYHVLVHIQVVALLPHPRSYPSTSRTNMVQERVSCMIAISLSH* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1151 114 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 2 66 IPR044286 -
Dod03g1151 114 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1151 Dod-Chr3 14365039 14367826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1151 2 65 C3H Transcription Factor Family AT2G41980 42.188 3.00e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1151 K04506 - gmx:100797881 96.6709