Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1150 ATGTGGTACAAGGTGAAGTGCATGCTGCAGATGATGTCCGAGTCAAAGAAGAGCCTCATGATAATAAAGTTGACGCATCAGGTGCCCAACAAGTTGAACAAGAGCCAACTTTCTAAATCCATTTTCAAGTATTATATTTCTAGGCCTAGAGCGAAAGGTTCATCAAAAGAGCATAGGTCTATTACTGTCAGCATTTCAGACCCAGATGTCCTACATTGCCCCATTTGTTTTGATTCCTTGAGTATTCCTGTCTATCAGTGTGATAAGGGTCATATTGTCTGCTCTGCCTGCCGGATCAATCTTGGGAAGAAGTGTGCCACGTGCTCATTTCCCATTGGCTCCAACCGCTGCAGGGCCTTCGAGAAAATTCTGGAATCTATTAAAGTACCATGCCCCAATGCAGAATATGGTTGCAAGGAGACAATAAGTTACAATGAGAAGAAAAACCATAAGCTTGAATGCATCTATGTACCATGTTCCTGCCCAATTGCGGATTGTGACTTTGTTGCCTCATCCAAGGAGTTATCCCTCCACTTCTGCGATGACCATGATTCTGGGGAGATATTTCTATATGATATCCCTTTTTCTTTCAGATTGAAGCCTGATGATGAATCCATTATTCTTCAAGAGGGTATTGAAGGAAACTTGTTTATACTCGATAATCATGTGTTGCCAGTGGGAAATGCAGTCAGTGTTAGTTGCATAAGGCCTAATTCTAAACCTGGGAATCATTTCGATATATTGGCTAAGTCACAGGGACGCAATCTAGAGTTTAAGTCTTTTGCTAAGAACATTCAACAATCTGATGTGGGCACTCCTTCATCAAGGTTCCTCTTGATCCCGTTTGATTATTTTGGTGCTTCTAAAACTCGCAAAGTGGAAATTTGCATAAGGTCAAACGATGCATAG 909 0.4147 MWYKVKCMLQMMSESKKSLMIIKLTHQVPNKLNKSQLSKSIFKYYISRPRAKGSSKEHRSITVSISDPDVLHCPICFDSLSIPVYQCDKGHIVCSACRINLGKKCATCSFPIGSNRCRAFEKILESIKVPCPNAEYGCKETISYNEKKNHKLECIYVPCSCPIADCDFVASSKELSLHFCDDHDSGEIFLYDIPFSFRLKPDDESIILQEGIEGNLFILDNHVLPVGNAVSVSCIRPNSKPGNHFDILAKSQGRNLEFKSFAKNIQQSDVGTPSSRFLLIPFDYFGASKTRKVEICIRSNDA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1150 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 51 299 IPR044286 -
Dod03g1150 302 SUPERFAMILY TRAF domain-like 126 297 - -
Dod03g1150 302 Pfam Seven in absentia protein family 116 185 IPR018121 GO:0005737|GO:0006511|GO:0007275
Dod03g1150 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 179 IPR013083 -
Dod03g1150 302 ProSiteProfiles Zinc finger SIAH-type profile. 126 184 IPR013010 GO:0008270
Dod03g1150 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 51 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1150 Dod-Chr3 14363249 14364816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1150 44 183 C3H Transcription Factor Family AT2G41980 32.215 1.58e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1150 K04506 - gmx:100778869 258.07