Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1141 ATGGTTCCTCAATTAGCATTTCATATGATATTAATATTATGCTGCTTGCATACATTGGCATCTGCACAACAAGACACGAGTATAGCACAACCCGGTTGTGATTCCAGGTGTGGAGATGTTGATATCCCTTACCCGTTTGGGATGAATGATCCCAAATGCTATGCTGACGAGTGGTTCGAAATAGTATGCAGCAACACCAGGGCTGCATTTCGGACAGCTCCTTACCTGAAAATTCTAGACTTGGGCGTGACATACATTGATTCATCAGCAGGCACTATTACTTTGAATCTACCAGCTTACACTTTAAACTGCGAACGCGAAGGCGTTAGTGATCGGCAAGTCGGGAGCCTGAGAGGAAGCCCCTTCGCGTATTCTCAGGAAAGAAACAAGTTTGTGGCGCAAGGTTGCAACCAAGTCGCTTTTTTGATGTCAAATGGCACACGAGTTAGTGCTTGTGCGTCCATTTGTGATGACAACGAGAATACTATCGCAGACATAACAACCGGTAAATGCAATGGCAAGTACTGCTGTGAGACTTCCTTGCCTTTGCATCTCTTAGAATACAACGTCACAACCGAAATCCTCAGAAAGAATCAAAGTCACTCAGGTCGGAGATGTTACTGCCGTGAAGGATTCCATGGCAATCCCTACATTGATGGAGGCTGTGAAAGAGATAAGGCATCAACGATTCTAGATCCCCCACGCAGAAGTTCACTATTAGGGTTTTGCAGCAATGGTGGCATTGCGTATGGCTCAGGTTGCAATGTCCGAGTATGGTGGCTATGGTTCCATGCCATAGCAATCACTACGAATCATAGGTCAAACATCCGACTGGAGGATCTTGTTCGCGCTCAAGTTTTGCAAAGTTGTGGTATTCCTTGTTTGTTTTTCAATGAAGACACGGCCTCCAACCGAGGATGGAGGCATGCAATTTCTGCCAGCAAACAAAAATTCTCTTCCGGTGAAGTTAATATTGAAAAAGCTAAACATTTTAGCTTAAGGGATTTAGAGAAGGCCACGGACCACTTTAATGTAAACAGAGTACTCGGAAAAGGAGGCCAAGGTACTGTCTACAAGGGTATGCTAGTAGATGGACAAATTATAGCAGTGAAAAAGTTTAGCGTCCATGGAAAAGTTGAAGAATTCATCAACGAATTTGTCATTCTCTCACAAATTAGCCATAGAAATGTGGTCAAATTGTTAGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGTAACCTTTTCAAATATTTGCATGAACAAAATCAGGACTTGCCAATGACATGGGACATGCGTTTGAGAATTGCCACTGAAGTTGCAGGAGCTCTCTTTTACTTACACTCAGCTGCTAATCAACCCACTTATCATAGAGACATCAAGTCAACAAATATACTACTAGATGCAAAGTATAGGACAAAAGTAGCTGATTTCGGAGCATCCAGGATGATTTCTATTGAAGACACTCACCTCACTACACGAGTCCAAGGAACTTTTGGATATTTGGATCCTGAATACTTCTATACTAGTCAGTTTACAGAAAAAAGTGATGTCTACAGCTATGGAGTAGTTCTTATTGAACTTTTGACTGGGCAAAAGCCAATATCCTCCTCAATATCCGAAGAAGCCAGAGGTTTAGCTCCACATTTTGTCATCTCTATGGAGGAAAATCGTCTATTTGATATTATTGATGAAAGGGTGACAAAAGAAGGGGTAAAAGAACATATCATTGCAGTTGCTAATCTTGCATATAGATGCCTTGCGTTGAATGGGACGAAAAGGCCAACTATGAGAGAAGTCGCTAGCGAATTGGATGAGATCTGGAAATTGGAAAGGAAGTCTAATGCACAACAAAACCTTGAAGAAATTGAGCTTGATGCAATTGAAGATTACCAACCTTGGGACATATATTCTGCTTCAGATACAGGGCCAACTCCAAGCAACAGAACACCCACCTCGGAGGCCATGCCTATTCTCATAAAATAA 2007 0.4195 MVPQLAFHMILILCCLHTLASAQQDTSIAQPGCDSRCGDVDIPYPFGMNDPKCYADEWFEIVCSNTRAAFRTAPYLKILDLGVTYIDSSAGTITLNLPAYTLNCEREGVSDRQVGSLRGSPFAYSQERNKFVAQGCNQVAFLMSNGTRVSACASICDDNENTIADITTGKCNGKYCCETSLPLHLLEYNVTTEILRKNQSHSGRRCYCREGFHGNPYIDGGCERDKASTILDPPRRSSLLGFCSNGGIAYGSGCNVRVWWLWFHAIAITTNHRSNIRLEDLVRAQVLQSCGIPCLFFNEDTASNRGWRHAISASKQKFSSGEVNIEKAKHFSLRDLEKATDHFNVNRVLGKGGQGTVYKGMLVDGQIIAVKKFSVHGKVEEFINEFVILSQISHRNVVKLLGCCLETEIPLLVYEFIPNGNLFKYLHEQNQDLPMTWDMRLRIATEVAGALFYLHSAANQPTYHRDIKSTNILLDAKYRTKVADFGASRMISIEDTHLTTRVQGTFGYLDPEYFYTSQFTEKSDVYSYGVVLIELLTGQKPISSSISEEARGLAPHFVISMEENRLFDIIDERVTKEGVKEHIIAVANLAYRCLALNGTKRPTMREVASELDEIWKLERKSNAQQNLEEIELDAIEDYQPWDIYSASDTGPTPSNRTPTSEAMPILIK* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1141 668 SUPERFAMILY Protein kinase-like (PK-like) 323 611 IPR011009 -
Dod03g1141 668 MobiDBLite consensus disorder prediction 645 661 - -
Dod03g1141 668 Pfam Protein tyrosine and serine/threonine kinase 345 611 IPR001245 GO:0004672|GO:0006468
Dod03g1141 668 ProSiteProfiles Protein kinase domain profile. 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1141 668 Gene3D Transferase(Phosphotransferase) domain 1 417 638 - -
Dod03g1141 668 MobiDBLite consensus disorder prediction 645 668 - -
Dod03g1141 668 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Dod03g1141 668 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 197 649 IPR045274 GO:0007166
Dod03g1141 668 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 187 IPR045274 GO:0007166
Dod03g1141 668 SMART serkin_6 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1141 668 Gene3D Phosphorylase Kinase; domain 1 313 416 - -
Dod03g1141 668 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 197 649 - -
Dod03g1141 668 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 12 187 - -
Dod03g1141 668 CDD STKc_IRAK 349 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1141 Dod-Chr3 14238923 14258133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1141 9 629 Receptor kinase-like Gene Family AT1G16260 40.115 1.03e-145 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod03g1141 PK_Tyr_Ser-Thr 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1141 - - lang:109329470 620.928