Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1140 ATGACACATCCTAGATACTATGCACAATTGGATGATGAAGTATCGGCACTACATAGATATAGCAAACCGAGGCCTAAGGTGTTGGGCCAAGCCGAACTTCTAAATCAGTCGGACTCAAAATTTTATACGAGTGAAAGGAAAAGCGGAGCAAAATGGGCTATAGGGGTTTTCTCAAGCCTTGGATCTATCATTTTACTCCTGGGTTCATGGTGGTTGTATGAAGTTCTGAGGAAAAGAATAATAGAAAAGAAACGCAAGGAAAAATACTTCAAACAAAACGGAGGTTTGTTGCTAAAGCAAAGGTTGTCTTCTGGTGAAGTTAATGTTGAAAAAGTTAAACACTTCAGTTTAAAAGACTTAGAGAAGGCCACCGACCGCTTTAATATGAACGCAATTCTCGGAAAAGGAGGCCAAGGCACCGTCTATAAGGGCATGTTAGCAGATGGAAAAATTGTGGCTGTGAAAAAGTTTAAGGTCCAAGGAAAAGTTGAAGAATTCATCAACGAATTTGTTGTTCTTTCACAAGTAAACCATAGAAATGTGGTCAAGCTATTAGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTCGAATATCTGCATGAACATAATGAGGATTTGCCAATGACATGGGATATGCGTTTGAGAATTGCCACCGAAGTTGCAGGAGCTCTCTTTTACTTACACTCAGCTGCTTCCCAACCCATTTATCATAGAGACATCAAGTCAACAAATATACTACTTGACGAAAAGTACAGGGCAAAAGTAGCAGATTTTGGATCATCTAGAATGATTTCTATTGAAGATACTCACCTCACCACAGCAGTTCAAGGGACTTTTGGATATTTAGACCCTGAATACTTTCATACGAGTCAATTTACAGAGAAAAGTGATGTTTATAGTTTTGGAGTTGTTCTTGCTGAGCTTTTGACTGGGCAAAAGCCAATATCGTCCTCAAGACCCGAGGAAGCCAAAAGTTTAGGTCCATATTTTGTTCTTTGTATGGAACAAAATCGTCTATTTGATATTATCGATGAAAGGGTGGCAAAGGAGGGGGGAAAGGAACATATAATTGCAGTTGCCAATCTTGCATACAGTTGCCTTGAGTTGAATGGGAATAGAAGGCCAAATATGAAAGAAGTCACAAACGAACTAGATGGGATCTGGAAATTGGAAAGGAACTTCGATGCACAACAAAACCATGAAGAAATTGAGCTCGCTGCAATTGAAGATTACCAATCTTGGTCCACATATTCTGCTTCAGAAAAGAGTGATGTCTATAGTTTTGGAGTAGTTCTTGTTGAACTTTTAACTGGGCAAAGGCCAATATCCTTTACAAGATCTGAGGAAGCTAGGAGTTTAGCTTCATATTTTGTTGTCTATGTGGATGAGAATCGTCTCTTTGACATTATTGACAAGAGAGTTGAGAAGCAAGGGGAGAGAGAACATATCACTGCCGTTGCCAATCTTGCATATAGATGCTTAGAGTTGAACGGGAAGAAACGACCAACTATGAAAGAAGTCACATTGGAATTAGAAGGGACTCAAAGATTGGTTAGCAAGTCTGATGTACAGCAAAACCTTGAAGAAATTGACCTTGATAGAATAGAAGGCTACCAACCTTGGACTGAATATTCTACATCAGATACATTGCCAACTACAAGCAATAAAGAACTCTTGTCGGAGGCTATGCCTATTCTTACGTTAAAATAA 1743 0.389 MTHPRYYAQLDDEVSALHRYSKPRPKVLGQAELLNQSDSKFYTSERKSGAKWAIGVFSSLGSIILLLGSWWLYEVLRKRIIEKKRKEKYFKQNGGLLLKQRLSSGEVNVEKVKHFSLKDLEKATDRFNMNAILGKGGQGTVYKGMLADGKIVAVKKFKVQGKVEEFINEFVVLSQVNHRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHEHNEDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHRDIKSTNILLDEKYRAKVADFGSSRMISIEDTHLTTAVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGQKPISSSRPEEAKSLGPYFVLCMEQNRLFDIIDERVAKEGGKEHIIAVANLAYSCLELNGNRRPNMKEVTNELDGIWKLERNFDAQQNHEEIELAAIEDYQSWSTYSASEKSDVYSFGVVLVELLTGQRPISFTRSEEARSLASYFVVYVDENRLFDIIDKRVEKQGEREHITAVANLAYRCLELNGKKRPTMKEVTLELEGTQRLVSKSDVQQNLEEIDLDRIEGYQPWTEYSTSDTLPTTSNKELLSEAMPILTLK* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1140 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Dod03g1140 580 Pfam Protein tyrosine and serine/threonine kinase 129 395 IPR001245 GO:0004672|GO:0006468
Dod03g1140 580 Pfam Protein tyrosine and serine/threonine kinase 424 521 IPR001245 GO:0004672|GO:0006468
Dod03g1140 580 PANTHER - 430 542 - -
Dod03g1140 580 SMART serkin_6 127 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1140 580 CDD STKc_IRAK 133 398 - -
Dod03g1140 580 SUPERFAMILY Protein kinase-like (PK-like) 109 395 IPR011009 -
Dod03g1140 580 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 52 416 IPR045274 GO:0007166
Dod03g1140 580 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 430 542 IPR045274 GO:0007166
Dod03g1140 580 Gene3D Phosphorylase Kinase; domain 1 99 200 - -
Dod03g1140 580 ProSiteProfiles Protein kinase domain profile. 127 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1140 580 Gene3D Transferase(Phosphotransferase) domain 1 201 418 - -
Dod03g1140 580 Gene3D Transferase(Phosphotransferase) domain 1 419 546 - -
Dod03g1140 580 SUPERFAMILY Protein kinase-like (PK-like) 429 520 IPR011009 -
Dod03g1140 580 PANTHER - 52 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1140 Dod-Chr3 14228023 14235906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1140 421 540 Receptor kinase-like Gene Family AT1G69730 45.833 1.99e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod03g1140 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1140 - - ahf:112796208 596.275