Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1139 ATGGTTCTGCAATTTGCATTTCATATCATATTAATATTATGCTCCGTGCATACATTGGCGTCAATTGTAGAATACCCACGTAAAACAGAACCTGTATGTGATGACAGTTGTGGAAATGTCACGATCCCTTACGCTAAACCTGGTTGTGATGACAGTTGTGGAAATGTCACGATCCCTTACCCGTTTGGGATGAATGATCCCAAATGCTATGCAGACACGTGGTTTGAAATAGAGTGCAGGAACACTTCAGATCAAGACCAAACACCTTACCTGAAATATATAGAAGTGGAGGTGAGATACATAAATGTACAATTTGCTTCGATTTTGGTCATGAATCCAATTTACCATTGGAACTGCAAACTCAAAGACGATGCTCAGCAAATCGTGGACCTGAGAGGAAGCCCCTTCGTGTATTCTCAGGGCTTGAACAAGTTTGTGGGCGTTGGTTGCAATAAGACGGCTTTTTTGATGTCAAATGATTCACCAGTTAGTGGCTGCGTGTCCATTTGTAATGACAAAGAAAATGTTGACATGGACCTCGCAACCAATCGTTGCAATGGCAAGTCATGTTGTGAGACTTCCTTGCCTTTGTATCTCTCAGAATACAACGTGACTACTGGAAATCTCGGACATAATCGTGGGGGTGATCAGTGCAATTATGCGCTGATTGTTGCAGCAGGATATTACAATTCTCAGGATTTTCGTGCTTATCGGCATTTGAAGTATGCTGTTGCGAGGCTTAAGTGGGAGATTCTTCGGAACTCAACTAGTAAGCTCCCTGCCAACTGCAAGAAGACTAATGGTACATCTTCGCAGTACGGTCACTCAGGCTGGAGATGTTACTGCGACTTCGGATACGACGGCAATCCTTATATTGATGGAGGCTGTGTTATGAGAGATCCGAAGCACCAGAAAAGAAGTCAAGCAAAATGGGCAATAGTAGGGGTTTTCTCAAGTCTTGGATCCATAATTTTACTCATTGCTTCATGGAAGTTGCATAAAGTTGTAAGGAAAAGAATAGCAAATAAACAAAAAGAAAAATACTTCAAACAAAATGGAGGTTTGTTGCTAGAGCAAAGGTTGTCTTCTGGTCAAGTTAATGTTGAAAAAGTTAAGCACTTCAGCTTAAAAGACTTAGAGAAGGCCACCGACCGCTTTAACACAAACAGAGTTCTCGGAAAAGGAGGCCAAGGTACTGTCTACAAGGGGATGTTTGCAGATGGAAAAATTATAGCAGTGAAAAAGCTTAAGGTTCAAGGAAAAGTTGAAGAATTCATCAATGAATTTGTTGTTCTTTCACAAATTAATCACAGAAATGTTGTCAGGTTATTAGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTTATTCCTAATGGTGACCTTTACGAATATTTGCATGAACATAATGAGGATTTGCCAATGACGTGGGATATGCGTTTGAGAATTGCCACCGAAGTTGCAGGAGCTCTCTTTTACTTACACTCAGCTGCTTCCCAACCAATTTATCACAGAGACATCAAGTCAACAAATATACTACTTGATGGAAAGTATAGGGCAAAAGTAGCAGACTTTGGATCATCTAGAATGATTTCCATTGAAGATACTCACCTCACCACAGTAGTTCATGGAACTTTTGGATATATAGACCCTGAATACTTTCATACTAGTCAATTTACAGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTTCTTGTTGAACTTTTGACTGGGCAAAAACCAATATCGTCCTTAAGGCCAGAGGAAGCGAAGAGTTTAGCTTCGTATTTTGTTCTCTCTATAGAGGAAAATCGCCTGTTTGATATTATTGATGAAAGGGTGGCAAAGGAGGGGGAAAAAGAACATATCAATGCAGTTGCCAATCTTGCATATAGATGCCTAGAGTTGAATGGGAAAAAAAGGCCAAATATGAAAGAAGTCACAAACAAATTAGAGGGGATCTGGAAATTGGAAAGGAAGTTTAATGCACAACGAAAGCATGAAGAAATTGAGCTTGCTGCAATTGAAGATTACCAATCTTGGGCCAGAGATCCTGCTTCAGATACAGGGCCAACTCCAAGCAACAGAACACCCACTTTGGAGGTTATGCCTATTCTCACAAAATAA 2136 0.4012 MVLQFAFHIILILCSVHTLASIVEYPRKTEPVCDDSCGNVTIPYAKPGCDDSCGNVTIPYPFGMNDPKCYADTWFEIECRNTSDQDQTPYLKYIEVEVRYINVQFASILVMNPIYHWNCKLKDDAQQIVDLRGSPFVYSQGLNKFVGVGCNKTAFLMSNDSPVSGCVSICNDKENVDMDLATNRCNGKSCCETSLPLYLSEYNVTTGNLGHNRGGDQCNYALIVAAGYYNSQDFRAYRHLKYAVARLKWEILRNSTSKLPANCKKTNGTSSQYGHSGWRCYCDFGYDGNPYIDGGCVMRDPKHQKRSQAKWAIVGVFSSLGSIILLIASWKLHKVVRKRIANKQKEKYFKQNGGLLLEQRLSSGQVNVEKVKHFSLKDLEKATDRFNTNRVLGKGGQGTVYKGMFADGKIIAVKKLKVQGKVEEFINEFVVLSQINHRNVVRLLGCCLETEIPLLVYEFIPNGDLYEYLHEHNEDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHRDIKSTNILLDGKYRAKVADFGSSRMISIEDTHLTTVVHGTFGYIDPEYFHTSQFTEKSDVYSFGVVLVELLTGQKPISSLRPEEAKSLASYFVLSIEENRLFDIIDERVAKEGEKEHINAVANLAYRCLELNGKKRPNMKEVTNKLEGIWKLERKFNAQRKHEEIELAAIEDYQSWARDPASDTGPTPSNRTPTLEVMPILTK* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1139 711 CDD STKc_IRAK 392 657 - -
Dod03g1139 711 Pfam Wall-associated kinase 184 283 IPR013695 GO:0004674|GO:0016021
Dod03g1139 711 Pfam Protein tyrosine and serine/threonine kinase 388 654 IPR001245 GO:0004672|GO:0006468
Dod03g1139 711 Gene3D Transferase(Phosphotransferase) domain 1 460 682 - -
Dod03g1139 711 MobiDBLite consensus disorder prediction 688 705 - -
Dod03g1139 711 SUPERFAMILY Protein kinase-like (PK-like) 371 658 IPR011009 -
Dod03g1139 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Dod03g1139 711 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 42 681 IPR045274 GO:0007166
Dod03g1139 711 MobiDBLite consensus disorder prediction 685 711 - -
Dod03g1139 711 Gene3D Phosphorylase Kinase; domain 1 358 459 - -
Dod03g1139 711 ProSiteProfiles Protein kinase domain profile. 386 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1139 711 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 42 681 - -
Dod03g1139 711 Pfam Wall-associated receptor kinase galacturonan-binding 49 107 IPR025287 GO:0030247
Dod03g1139 711 SMART serkin_6 386 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1139 Dod-Chr3 14189748 14196447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1139 41 679 Receptor kinase-like Gene Family AT1G16260 43.994 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod03g1139 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1139 - - gmx:100798794 837.795