Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1109 ATGAGAAACTTATTCTTTCAGATTACATCTCTCCAGGGAAGTCTTGCAAGTTTTCTTTATGATCGACCGGGAAGAAAAGGTCCACCATTAACTTGGGCCCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCCACAAATGTCTTGTTAGATACAGCCGATATGAACGCACGTGTTGCTGATTACTGCCTTCACCGCCTTATGACACAGGCTGGTACTATTGAACAGATTCTTGATGCTGGGGTCTTGGGTTATCGTGCATTGGAGTTAGCTGCTTCCAAGAAGCCAATGCCTTCCTTCAAATCAGATGTTTATGCATTTGGAGTGATACTTTTGGAGCTTTTAACTGGAAGGTGTGCTGGTGATGTGATTTCTGGTGAGCAGGGAGGCATTGATTTGACAGATTGGTTAAGGCTGCGGGTAGCTGAAGGTCGCGGCTCGGAATGTTTTGATGCTACCTTGTTGCCAGAGTTGCGCAATCCAGTTGTAGAAAAGGGAATGAAGGAGGTCCTAGGAATAGCTATCAGATGCATTCGATCTGTATCCGAGAGGCCAGGCATCAAGACCATATATGAAGATCTTTCTTCTATATAG 645 0.4527 MRNLFFQITSLQGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQILDAGVLGYRALELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEQGGIDLTDWLRLRVAEGRGSECFDATLLPELRNPVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1109 214 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1109 214 PANTHER - 12 214 - -
Dod03g1109 214 PANTHER OS07G0626500 PROTEIN 12 214 - -
Dod03g1109 214 Pfam Protein tyrosine and serine/threonine kinase 12 134 IPR001245 GO:0004672|GO:0006468
Dod03g1109 214 SUPERFAMILY Protein kinase-like (PK-like) 13 211 IPR011009 -
Dod03g1109 214 Gene3D Transferase(Phosphotransferase) domain 1 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1109 Dod-Chr3 13729654 13730993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1109 12 214 Receptor kinase-like Gene Family AT3G51740 39.806 1.71e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod03g1109 PK_Tyr_Ser-Thr 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1109 - - gmx:100795611 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1109 03 13729654 13730993 Dod03g1109 03 13729654 13730993 ECH