Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g1106 | ATGGGGAAGGTTCTTGGGGAGGGGCTCTCTTTTGTGTTGATTCTGGTGATGGTTTCAGTGACAGTGAGCACTGTTGAGGCTCAACCAAAGTCCTTTCTTATAAACTGTGGGTCAAATTCTTCTGTGAATGTGGATGGTAGAAGATGGGTTGGTGACATGGTGCCTAATGATAATGTCTCCCTCAGCTCCTCCCCTGGTGTTGCTATTTCCACTTCTACATTAAGTGGCAGTTCAGTCTATGATTCCCTCTACAAAACAGCTAGGATTTTCAGTGATTCTTTGAATTACACTATCAAAGATGTTCAGGGAAACTATGTTGTTAGGTTCCATTTCTGCCCTTTTGTGGATAAGGACTACAATATGAATGATTCCTCATTTGGTTTGGTGGCTAATGGTCTGAAACTATTGTCTGAGTTCAATGTTCCAGAGAAGATAGACCACAAGAATGGGAATTTGCAGAATTCAGGAAAGAATACTAGTTCATACTTCTTGATTAAGGAGTATATCCTGGCTATCAGTGCAGATGTGCTAGTGATTGAGTTTGTTCCAACTGGAAGCTCATTTGGATTCATCAATGCCATTGAAGTTGTCCCGGTTGTGGATGAGCTTTTTGCTGGCATGGTCAGTAAAGTTGGTGGAAGTGGTGGAAACTTGAATGTGAGTGGCCGCGGGATGGAGACCATGTATAGATTAAACGTTGGTGGTCCTGAGATTCAACCTGATCAGGATCCTGATCTTTGGAGGGGTTGGGAAATGGATTCTGGCTATATGATCACAGAAAATGCAGGGTCAGGAATTAATAACAGTTCCAATATCACTTACGCATCTGCGAATGATACTTCAGTGGCTCCTCTCCTTGTATATGAAACTGCAAGGGCAATGTCTAACACTCAAGTCCTGGACAAGAGATTTAACATGTCATGGAAGTTTGAAGTGGATCCTGATTTCGAATATTTGGTTCGGCTACATTTCTGCGAGCTGATTTATGATAAGGCAAATGAGAGGATTTTCAGGATCTACATAAACAACCGGACAGCTGCAGATAACGTTGATGTTTTCGTTCGAGCAGGAGGGAAGAACAAAGCATATCACCAGGATTACTTTGATACAGTGTCCTTGAGGATTGACACACTTTGGGTTCAACTTGGTCCTGATACAGCTGCTGGAGCTGCAGTAACTGATGCTCTCTTGAATGGACTGGAGATTTTCAAGCTTAGTCGAAACGGGAATTTTGCCTATGTGGATAGGCATGACTCAGCTGGCAATGCAGCAAGCAAATCAAAAGCAGAAGTTCTTTGGATAGGAATTGGAGCAGGTCTAGCTTCTGTTGCTATAATTGCATTTATAACTGTTCTTGTTTTCTGTTTCTGCAAAAGCCGGAGGAAAGAGTCGAGTGATACCAAAAACAACTCTCCGGGTTGGCGACCATTGTTCCTTGTTGGGGCTACTGTAAAAAGCACTGTAGGCATCAAGGGATCAGTAGGAACTCAAAAGGCTTATGGATCTGTAGTCTCAACGAGAGCTGGCAAGCACTTTACATTGGCAGAGATCAATGCCGCAACAAATAATTTTGATGAGAGCTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGATGATGGTGTCCCTGCTGCAATCAAGCGAGCCAACCCGCAGTCTGAGCAAGGCCTGGCTGAATTCGAGACAGAAATTGAGATGCTTTCCAAACTCAGGCACAGGCATCTTGTGTCCTTGATTGGTTTCTGTGAAGAGAAAAATGAAATGATTTTGGTGTATGAGTACATGGCAAACGGAACTCTTAGAAGCCATCTGTTTGGGAGCGATCTCCCTCCACTAACTTGGAGGCAGCGCCTAGAGGTGTGCATCGGTGCTGCGAGGGGACTTCACTACCTTCACACAGGAGCCGAGCGCGGAATAATTCACAGGGATGTCAAGACAACCAACATATTGTTGGATGAGAATTTTGTGGCCAAAATGGCTGATTTTGGTTTGTCAAAAGATGGACCTGCTCTGGACCATACTCATGTTAGCACAGCTGTGAAGGGAAGCTTTGGCTATCTAGACCCTGAGTACTTCAGGAGACAGCAATTAACTGAGAAATCAGATGTTTACTCATTTGGGGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTAATCAACCCCACCTTGCCTAAAGATCAGATCAACCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCACTTCACACAATCATTGACCCTCATCTCAAGGGAAATTATTGTCCAGAATCCTTGTCCAAGTTCGGGGAGATAGCTGAAAAATGTCTCGCCGACGATGGGAAGAGCAGGCCCACGATGGGGGAGGTGTTGTGGCACTTGGACTATGTGTTGCAGCTGCATGAAGCTTGGTTGAACATGCACAGTAGAGAAACTTCCTTCTCTGATAGCCAATGTCTGAGAGGTGTAAAAGAAGGAGGAATAGAAATGGTGCACGATCCTTCAAGCCAAGATGAAGAGGATGTGACAAGTGATTGA | 2538 | 0.4429 | MGKVLGEGLSFVLILVMVSVTVSTVEAQPKSFLINCGSNSSVNVDGRRWVGDMVPNDNVSLSSSPGVAISTSTLSGSSVYDSLYKTARIFSDSLNYTIKDVQGNYVVRFHFCPFVDKDYNMNDSSFGLVANGLKLLSEFNVPEKIDHKNGNLQNSGKNTSSYFLIKEYILAISADVLVIEFVPTGSSFGFINAIEVVPVVDELFAGMVSKVGGSGGNLNVSGRGMETMYRLNVGGPEIQPDQDPDLWRGWEMDSGYMITENAGSGINNSSNITYASANDTSVAPLLVYETARAMSNTQVLDKRFNMSWKFEVDPDFEYLVRLHFCELIYDKANERIFRIYINNRTAADNVDVFVRAGGKNKAYHQDYFDTVSLRIDTLWVQLGPDTAAGAAVTDALLNGLEIFKLSRNGNFAYVDRHDSAGNAASKSKAEVLWIGIGAGLASVAIIAFITVLVFCFCKSRRKESSDTKNNSPGWRPLFLVGATVKSTVGIKGSVGTQKAYGSVVSTRAGKHFTLAEINAATNNFDESLVIGVGGFGKVYKGEIDDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLTWRQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLHTIIDPHLKGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLDYVLQLHEAWLNMHSRETSFSDSQCLRGVKEGGIEMVHDPSSQDEEDVTSD* | 846 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g1106 | 845 | CDD | STKc_IRAK | 530 | 795 | - | - | |
Dod03g1106 | 845 | ProSitePatterns | Protein kinases ATP-binding region signature. | 530 | 552 | IPR017441 | GO:0005524 | |
Dod03g1106 | 845 | PANTHER | OSJNBA0058K23.13 PROTEIN | 21 | 839 | - | - | |
Dod03g1106 | 845 | ProSiteProfiles | Protein kinase domain profile. | 524 | 796 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1106 | 845 | Gene3D | - | 30 | 199 | - | - | |
Dod03g1106 | 845 | Gene3D | - | 224 | 407 | - | - | |
Dod03g1106 | 845 | Gene3D | Phosphorylase Kinase; domain 1 | 487 | 599 | - | - | |
Dod03g1106 | 845 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 644 | 656 | IPR008271 | GO:0004672|GO:0006468 | |
Dod03g1106 | 845 | Pfam | Malectin-like domain | 34 | 404 | IPR024788 | - | |
Dod03g1106 | 845 | SMART | serkin_6 | 524 | 797 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1106 | 845 | Pfam | Protein tyrosine and serine/threonine kinase | 529 | 791 | IPR001245 | GO:0004672|GO:0006468 | |
Dod03g1106 | 845 | SUPERFAMILY | Protein kinase-like (PK-like) | 503 | 794 | IPR011009 | - | |
Dod03g1106 | 845 | PANTHER | OS07G0166700 PROTEIN | 21 | 839 | IPR045272 | GO:0004714|GO:0006468 | |
Dod03g1106 | 845 | Gene3D | Transferase(Phosphotransferase) domain 1 | 600 | 817 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g1106 | Dod-Chr3 | 13702920 | 13706484 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g1106 | 1 | 825 | Receptor kinase-like Gene Family | AT1G30570 | 63.724 | 0.0 | 1105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Dod03g1106 | Malectin_like | 2.3e-34 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g1106 | - | - | gmx:100791403 | 1419.83 |