Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1103 ATGGCTAGCTGCTACTCCCACCCTCACATATGCCAATGTTTGAGTCGCTTGTTAACTCTCCGACAGCATTCTCCGGTCACCATAACTGGTGGCCGGTGCAAAACCGGTCAGCACTTCGTGGAGGAAGTGTTGGCCTTGGCTCAAGGGCTACTCCACCTAGGCGTCACACCCGGTGACGTGGTTGCCATCTCAGCTTACAACAGTGACTGTTATCTCGAATGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGTTGGAGTTTCGAAGAGGCAAGATTAGCAATGACTGCGGTGAGGCCAGTGATGTTAGTGACTGATGAGAGCTGCTACTCATGGTACTCAAAACTTCAGGAAATTGATATTCCATCCTTGAGGTGGCATGTTTTGTTGGATTCCCCTCCCTCAGATTTTTCAAAGAAGTGGAATGTGTTGACTCCAGAAATGCTTATGAGGCATCCCATAAAGCCTCTACCATTTAATTACTCCTGGGCACACGAAGGCGCTGTCATAATATGCTTTACTTCAGGAACAACGGGAAAGCCTAAAGGGGTCACAATAAACCATGGAGCTTTGATCATACAATCGTTAGCAAAGATTGCCATAGTTGGGTACAGTAGGGATGATGTTTATCTGCATACTGCTCCATTGTGCCATATTGGTGGCTTATCATCAGCCATGGCCATGCTCATGGTTGGAGGTTGCCATGTCATGATGCCAAAGTTTGATGCAGAATCAGCTGTTGATGCCATAGAGCAATATGCCGTGACATCTCTAATCACGGTTCCGGCAATAATGGCCAGTCTGATCTCTTTAATTAGACACATAGAGAGCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAGGATACTAGCATATTCTTCCATAAAGCTAAGCTTATCTCAGCTTACGGGATGACAGAGGCATGTTCTTCACTGACATTCTTGACCCTCTATGGTCCAATGTGTGAAACCACCGGCCGGCCCCTTCAAATAGTAGGCGAGGTAGCATCATCTAGCTGCATTCACCAGCCTCAAGGCATTTGTGTTGGCAAAGCTGCACCCCATGTAGAACTCAAGATATGTGTGGATGGCACTGGTCACACTGGAAGGATTTTAACTAGAGGACCACATGTAATGCTTGGTTATTGGGATCAAATTCAAACAAACCCTTCAAATCCCAGGAATGAGGCATGGTTTGACACAGGTGACATTGGATCAATTGATAATCAAGGTAATTTGTGGCTCCTTGGAAGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTATCCTGAAGAGGTTGAGACAATTCTACTTGTACATCCAGGGATTGCAAGTGTTGTTATTGTAGGAATCCCAGATGCCCGCCTTACAGAGATGGTAGTAGCATGTATCCAACTAAGAGAAAATTGGCAATGGTCAGAGCAGTCTAATTCAAATCAAGAGTTCCACCTATCTAGAAAGAATCTCCAGCAATATTGTATTGAAAATAATCTAAGCAGGTTTAAGATACCAAAGATATTTATTATATGGAGGAAGCCTTTTCCACTCACTACCACAGGAAAAGTAAGAAGAGACCAAGTAAGGAAGGATGCAATGTCTCAGCTACAATCTTCACATAGTAGTCTTTGA 1689 0.4446 MASCYSHPHICQCLSRLLTLRQHSPVTITGGRCKTGQHFVEEVLALAQGLLHLGVTPGDVVAISAYNSDCYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMTAVRPVMLVTDESCYSWYSKLQEIDIPSLRWHVLLDSPPSDFSKKWNVLTPEMLMRHPIKPLPFNYSWAHEGAVIICFTSGTTGKPKGVTINHGALIIQSLAKIAIVGYSRDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVMMPKFDAESAVDAIEQYAVTSLITVPAIMASLISLIRHIESWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTEACSSLTFLTLYGPMCETTGRPLQIVGEVASSSCIHQPQGICVGKAAPHVELKICVDGTGHTGRILTRGPHVMLGYWDQIQTNPSNPRNEAWFDTGDIGSIDNQGNLWLLGRTNGRIKSGGENIYPEEVETILLVHPGIASVVIVGIPDARLTEMVVACIQLRENWQWSEQSNSNQEFHLSRKNLQQYCIENNLSRFKIPKIFIIWRKPFPLTTTGKVRRDQVRKDAMSQLQSSHSSL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1103 562 SUPERFAMILY Acetyl-CoA synthetase-like 9 554 - -
Dod03g1103 562 ProSitePatterns Putative AMP-binding domain signature. 177 188 IPR020845 -
Dod03g1103 562 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 7 553 - -
Dod03g1103 562 CDD AFD_class_I 177 543 - -
Dod03g1103 562 PANTHER ACYL-COA SYNTHETASE 7 553 - -
Dod03g1103 562 Pfam AMP-binding enzyme C-terminal domain 452 541 IPR025110 -
Dod03g1103 562 Gene3D - 439 554 IPR045851 -
Dod03g1103 562 Pfam AMP-binding enzyme 30 443 IPR000873 -
Dod03g1103 562 Gene3D - 3 436 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1103 Dod-Chr3 13677103 13682317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1103 31 495 Monolignol Biosynthesis Gene Families AT4G05160 27.778 3.89e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1103 K14760 - gmx:100809925 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1103 03 13677103 13682317 Dod03g1103 03 13677103 13682317 ECH