Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1096 ATGGCACTTTCTATGCACAAAGACTCATCAAATAACCAGATGGATTCGAGCAAGTATGTGAGGTATACACCTGAGCAGGTTGAGGCTTTGGAGAGAGTCTATGCAGAATGCCCGAAGCCAAGCTCATTAAGGAGGCAGCAACTCATCAGAGAGTGCCCCATCCTTTCAAATATTGAACCCAAACAGATCAAAGTTTGGTTCCAGAACCGCAGATGCCGTGAGAAGCAAAGGAAGGAAGCCTCTCGTCTGCAGACAGTGAATAGAAAGCTGACTGCTATGAACAAGCTGCTTATGGAAGAGAATGACCGTTTGCAGAAGCAAGTCTCACACTTGGTCTATGAAAATGGATATATGAAGCAACAGATACAGACTGCATCTGCTACTACTACCACAGACAATAGCTGTGAGTCTGTGGTGATGAGTGGTCAGAACCAACAGCAAAACCCAACACCTCAGCATCCCCAGAGGGATGCCAACAACCCAGCTGGTCTTCTCGCTATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTACTGGGGTGGCGGCACGAGCCTGCGGCCTCGTGAGTCTTGAACCCACAAAGGTTGCTGAGATTCTCAAAGATAGGCCATCTTGGTATCGCGACTGTCGGTGCCTTGATGTGTTGAGCATTGTCCCTACAGGGAATGGGGGCACTATAGAGCTGATGTACATGCAGACTTATGCGCCAACAACATTGGCAGCAGCACGTGACTTCTGGACACTAAGATATACTACAAGTTTGGAAGATGGAAGTCTAGTGATTTGTGAGAGGTCATTGACTTCTTCGACTGGTGGCCCCACAGGGCCTCCTCCTTCAAACTTTGTGAGAGCTGAAATGCTTCCCAGTGGTTTTCTAATTCGACCTTGTGAGGGTGGTGGCTCCATTATTCATATTGTTGATCATATTGATTTAGATGTCTGGAGTGTTCCTGAAGTGCTGAGGCCGCTTTATGAGTCATCAAAAATCTTGGCCCAGAAATTGACCATTGCTGCCTTGCAACATATAAGACAGATTGCACAAGAATCTAGTGGAGAAATTCAGTATGGTGGGGGACGGCAGCCTGCTGTGTTGAGGACATTTAGTCAGAGACTCTGCAGAGGGTTCAACGATGCTGTGAATGGATTTGTGGACGATGGTTGGTCACTGATGAGTAATGATGGGGTAGAAGATGTGACTATAGCCATAAACTCTTCTCCCAACAAGTTTTTGGGGTCCCACTACAATTCGTCTATGTTCCCAGCATTTGGAGGTGGTGTACTTTGTGCCAAGGCATCAATGCTGCTGCAGAATGTCCCTCCAGCTTTGCTTGTTCGATTTTTGAGAGAGCATCGGTCAGAGTGGGCTGATTATGGGGTTGATGCATACTCTGCTGCATGTCTTAAGGCTAGTCCCTATGCAGTTCCTTGTGCAAGACCTGGTGGTTTCCCCAGCAGCCAGGTCATTTTACCCCTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGAATAGAGGGCCATGCATTTTCCCCTGAAGACGTGGCAATGGCACGGGACATGTATTTACTGCAGCTTTGCAGTGGAGTTGATGAAAATGCAATTGGAGCTTGTGCTCAATTAGTGTTTGCACCTATTGATGAATCATTTGCAGATGATGCTCTCCTACTCCCTTCTGGTTTCCGTGTGATACCACTGGACCCGAAAACAGATAGTCCAGCCACCACTAGGACATTGGATTTGGCATCGACTCTTGAAGTAGGATCTGGCAATACTCGCGCTGCTGGTGAAGCTGATCCGAATGGTTACAACCTTAGGTCTGTCCTTACCATTGCATTCCAATTTACCTTTGAAAATCATCTGCGAGACAATGTAGCTGCAATGGCCCGCCAGTATGTGCGTAGTGTTGTGGGATCTGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCTCGGCTCAGTACTCAGCTGGGGCCAAAGTCTCTCCCTGGTTCACCAGAGGCTCTAACTTTAGCACGATGGATCTGCAGAAGCTACAGGATCCACACTGGCACTGATCTTTTCAGAGTTGAGTCTACGTCTGGCGATGCACTTTTGAAGCAGCTTTGGAACCATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCGCCAGTTTTCAGCTTTGCTAACCAAGCGGGACTTGACATGCTCGAAACTACTCTTGTCGCCCTTCAAGATATAATGCTCGATAAAGTTCTTGATGAATCTGGCAGGAAGGTTCTCTGCTCTGAGTTCTCCAAGATAATGGAACAGGGATATGCATATCTGCCGGCAGGAATATGTGCATCCAGCATGAATAGGCCAGTGTCCTATGAGCAGGCCATTGCATGGAAAGTTCTCAATGATGATGATTCCAATCACTGCCTGGCCTTCATGTTCATGAACTGGTCCTTTGTCTGA 2541 0.4766 MALSMHKDSSNNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIQTASATTTTDNSCESVVMSGQNQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCTGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMSNDGVEDVTIAINSSPNKFLGSHYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVAMARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKTDSPATTRTLDLASTLEVGSGNTRAAGEADPNGYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWICRSYRIHTGTDLFRVESTSGDALLKQLWNHSDAIMCCSVKTNASPVFSFANQAGLDMLETTLVALQDIMLDKVLDESGRKVLCSEFSKIMEQGYAYLPAGICASSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSFV* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1096 846 CDD homeodomain 18 78 IPR001356 GO:0003677
Dod03g1096 846 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g1096 846 MobiDBLite consensus disorder prediction 133 157 - -
Dod03g1096 846 Pfam START domain 167 374 IPR002913 GO:0008289
Dod03g1096 846 Gene3D - 9 84 - -
Dod03g1096 846 Gene3D - 200 383 IPR023393 -
Dod03g1096 846 CDD bZIP 70 109 - -
Dod03g1096 846 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Dod03g1096 846 SUPERFAMILY Bet v1-like 414 654 - -
Dod03g1096 846 Coils Coil 87 107 - -
Dod03g1096 846 SMART HOX_1 15 81 IPR001356 GO:0003677
Dod03g1096 846 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Dod03g1096 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 846 IPR044830 GO:0003700
Dod03g1096 846 SUPERFAMILY Homeodomain-like 17 80 IPR009057 -
Dod03g1096 846 SUPERFAMILY Bet v1-like 167 378 - -
Dod03g1096 846 MobiDBLite consensus disorder prediction 133 159 - -
Dod03g1096 846 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Dod03g1096 846 SMART START_1 166 376 IPR002913 GO:0008289
Dod03g1096 846 Pfam MEKHLA domain 701 845 IPR013978 -
Dod03g1096 846 CDD START_ArGLABRA2_like 161 377 - -
Dod03g1096 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1096 Dod-Chr3 13599309 13605135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1096 5 846 Homeobox Transcription Factor Family AT2G34710 81.206 0.0 1418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod03g1096 START 1.9e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1096 K09338 - gmx:100807428 1588.93