Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1063 ATGAAGGAAGCGGGTGGTAGGAAGCAAGGTGCAGCCTCACCTTGTGCTGCATGCAAGCTTCTGAGGAGAAGGTGTGCCCAAGATTGTGTTTTTGCCCCTTATTTCCCAGCTGATGAGCCCCAGAAGTTTGCAAATGTGCACAGGGTGTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGACCTACCAATGCATCAACGAAGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCTAGAGTCCGAGACCCTGTGTATGGGTGTGTAGGTGCCATTTCTTCTCTTCAACAACAAATTGATGTTCTACAGACCCAACTGGCCCTAGCCCAGGCTGAGGTGGTCCACCTTAGGGTGCGCCAAAGCTCATGCCTTTCCAATCCTGGGGTGGGCCCCAATAGCCCAACCAACAGTGGGTCCCCACCCTCCAAGATAATGGACTCACAAGTCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAAGCCAGCTATGGTGATTCAATGTGGTCATGA 516 0.5155 MKEAGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHRVFGASNVNKMLQDLPMHQRRDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQSSCLSNPGVGPNSPTNSGSPPSKIMDSQVKPIFDMDMVVDQASYGDSMWS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1063 171 Coils Coil 93 113 - -
Dod03g1063 171 MobiDBLite consensus disorder prediction 125 145 - -
Dod03g1063 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 162 - -
Dod03g1063 171 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Dod03g1063 171 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Dod03g1063 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 162 - -
Dod03g1063 171 MobiDBLite consensus disorder prediction 125 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1063 Dod-Chr3 12961791 12966059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1063 1 171 AS2 family AT1G31320 79.070 1.18e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod03g1063 LOB 8.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1063 - - gmx:100794219 291.582