Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1037 ATGAGTAGCAATATTTCTAGAAATTACGGAGTCATTTTTGCTCCCCACATTCAGGCATTCCGACTTCAGTACCCGGTTGTCCATTCTCCAAACAAACAAAACTGCAATGCAAAGCCAAAGCCATCACCAACTCGTACCACACAAAACAACAACCCAACCAACCCACATTCCCACCCGAACCAACCACTTCCCAAACCTGACAAACACCAAACCACCATGTCCTCCGACCAAACCACCACCACAAACGAGGTTGTCTGCGTCACCGGAGCAAACGGCTTCATCGGTTCCTGGCTAGTCCACACCCTCCTCCACCGCCACCACCCTCGCTACTCCATCCACGCCACCTTCCTCCCATCATCCGACCCCTCCCACCTCCTCACCCTCCACGCCGACGCCCCTTCCCGCCTCACCCTCTTCCCCGCCGACATCCTCGACTCCACTGCCGTCTCCGCTGCTATCTCCGGCTGCTCCGGCGTCTTCCACGTCGCATCCCCCTGCACCCTCGACGACCCCTCCGACCCCGAAAACGACCTCTTCCGCCCCGCCGTACACGGCACCCTTAACGTCCTCCGAGCCGCGAAGGAAACCCACGCGCGGCGCGTGGTCTTCGATGAGGAGTCGTGGACGGACGTGGAGTTCTGCAAGGAGAGGGGGAAATGGTACCCGGTGTCGAAGACGGCGGCGGAGAAGGCGGCGTGGGAGTTTAAGGAAGAGCACGGAGGCGCCGATGTGGTGGCGGTTTTGCCGGCGACGTGTTTGGGGCGGCTGCTGCAGAAGGAGCTGAATGCGAGCTCGGCTGTGCTGCAGAGGCTGATGATGGGGTCGAGGGAGACGCAGGAGTATCACTGGCTTGGTGCGGTGCACGTGAGGGATGTTGCGAGGGCTCAGGTTTTGCTCTATGAGAATCCCTCTGCTGAGGGTAGATACTTGTGTACTAATGGTATCTACCAGTTCTCTAGTTTTGCTGAGACTGTGTCCAAGTTATACCCTGATTTTCCTATCTACAGGTTCCCTGAGGAAACACAACCTGGCCTGACACCATGTAAAGATGCAGCAAGGAGGCTAATAGATTTGGGCTTTGTCTTCACGCCAGTTGAAGATGCTGTGAGCGAAGCAGTGGAGAGCCTTATAGCTAAAGGCTTCCTCCAACGACCACCCTCACGGAATTAG 1170 0.5692 MSSNISRNYGVIFAPHIQAFRLQYPVVHSPNKQNCNAKPKPSPTRTTQNNNPTNPHSHPNQPLPKPDKHQTTMSSDQTTTTNEVVCVTGANGFIGSWLVHTLLHRHHPRYSIHATFLPSSDPSHLLTLHADAPSRLTLFPADILDSTAVSAAISGCSGVFHVASPCTLDDPSDPENDLFRPAVHGTLNVLRAAKETHARRVVFDEESWTDVEFCKERGKWYPVSKTAAEKAAWEFKEEHGGADVVAVLPATCLGRLLQKELNASSAVLQRLMMGSRETQEYHWLGAVHVRDVARAQVLLYENPSAEGRYLCTNGIYQFSSFAETVSKLYPDFPIYRFPEETQPGLTPCKDAARRLIDLGFVFTPVEDAVSEAVESLIAKGFLQRPPSRN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1037 389 MobiDBLite consensus disorder prediction 30 56 - -
Dod03g1037 389 MobiDBLite consensus disorder prediction 64 79 - -
Dod03g1037 389 CDD FR_SDR_e 85 360 - -
Dod03g1037 389 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 83 202 - -
Dod03g1037 389 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 204 372 - -
Dod03g1037 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 376 IPR036291 -
Dod03g1037 389 MobiDBLite consensus disorder prediction 30 79 - -
Dod03g1037 389 Pfam NAD dependent epimerase/dehydratase family 85 305 IPR001509 -
Dod03g1037 389 Gene3D - 74 202 - -
Dod03g1037 389 Gene3D - 203 389 - -
Dod03g1037 389 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 83 202 - -
Dod03g1037 389 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 204 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1037 Dod-Chr3 12614789 12619212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1037 82 382 Monolignol Biosynthesis Gene Families AT2G02400 59.375 1.06e-136 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1037 - - vra:106775739 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1037 03 12614789 12619212 Dod03g1037 03 12614789 12619212 ECH