Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1035 ATGCTAATAGTCCCAATGGACTTTTTTCCTGACAAAAATCATGCACCCAGCGGGTCGAGTAACTCATCGAACACTGCAATCGTAATTGGAGCGGCAGTTGGCGGTTCTTCTGTCCTGCTTGTGCTATTGTTCCTTGCAGGTGTTTATGCTTTCCGCCAGAACAGAAGGGCAGAAAGAGCGATTTCGAGAAGCAATCCTTTTGGAAACTGGGATCCAAATAAAAGCAATTGTGGCACCCCTCAGATAACTGCAGCAAGGCAGTTCTCTTTTAAAGAACTTAAGAAATACACAAATAACTTTTCACAAGCCAATGATATTGGATCAGGAGGTTATGGAAAGGTTTATAAGGGAACTCTTCCCTCTGGGCAACTGATAGCCATAAAACGAGCTCTGAAAGAATCACAGCAGGGAGGGATAGAATTTAAAGCAGAGATTGAACTCCTTTCAAGGATCCACCACAAAAATCTGGTAAGCCTTGTGGGATTCTGCTTTGAACAAGGAGAACAAATGCTGGTTTATGAGTTTGTTCCAAATGGAAGTTTGAAGGATACTATCTCAGGGAAATCAGGCATTGTATTGAGCTGGAGGAGAAGGATAAAAGTAGCCCTTGGTGCAGCAAGGGGTTTGGCTTATCTTCATGAGCATGCCAATCCTCCTATTATACACAGGGACATCAAATCAAACAACATTTTGTTGGATGAGACCCTTGATGGAAAAGTTGCTGATTTTGGTCTCTCCAAACCTATGTTAGATTGTGGAAAAGATCATATTACCACTCAAGTCAAAGGAACACTGGGTTACTTGGATCCAGAATACTACACAAGTCAGCAGCTGACTGAGAAGAGTGATGTTTATAGTTTTGGAGTGCTGATGTTGGAGCTGATAACCGGAAGAAAGCCTATAGAACGAGGAAAATACATCGTGAAAGTGGTCAGGAACGTGATCGATAGGACTAAGGACTTGTATGGCCTTCATGAACTCCTTGACAAAGCCCTCAGGTCAGGGTCAAAACTGACTGGTTTTGAGAAGTTTGTGGATCTTGCAATGAAGTGTCTTGAAGAGTCAGGAGCTGAAAGGCCTGCAATGGGTGATGCAGTGACAGAGATTGAACTCATATTGCGCTCAGCTGGTTTGGACCCCACTTCTGAATCAACAGCATCCACTTCATCTAGTTTTAGACTCAATGAGGAAAACACAGGGAGTTCCCACCAGCCTTACAGCAATGAATCCTTGTATTCAAGTGCAGAACAGTTAACTACAAAGAAGGAGACTAGTTGA 1278 0.4304 MLIVPMDFFPDKNHAPSGSSNSSNTAIVIGAAVGGSSVLLVLLFLAGVYAFRQNRRAERAISRSNPFGNWDPNKSNCGTPQITAARQFSFKELKKYTNNFSQANDIGSGGYGKVYKGTLPSGQLIAIKRALKESQQGGIEFKAEIELLSRIHHKNLVSLVGFCFEQGEQMLVYEFVPNGSLKDTISGKSGIVLSWRRRIKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDETLDGKVADFGLSKPMLDCGKDHITTQVKGTLGYLDPEYYTSQQLTEKSDVYSFGVLMLELITGRKPIERGKYIVKVVRNVIDRTKDLYGLHELLDKALRSGSKLTGFEKFVDLAMKCLEESGAERPAMGDAVTEIELILRSAGLDPTSESTASTSSSFRLNEENTGSSHQPYSNESLYSSAEQLTTKKETS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1035 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Dod03g1035 425 PANTHER OS01G0253100 PROTEIN 15 403 IPR045271 GO:0004714|GO:0006468
Dod03g1035 425 MobiDBLite consensus disorder prediction 379 425 - -
Dod03g1035 425 ProSiteProfiles Protein kinase domain profile. 100 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1035 425 Pfam Protein kinase domain 101 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1035 425 CDD STKc_IRAK 106 372 - -
Dod03g1035 425 SUPERFAMILY Protein kinase-like (PK-like) 86 402 IPR011009 -
Dod03g1035 425 ProSitePatterns Protein kinases ATP-binding region signature. 106 132 IPR017441 GO:0005524
Dod03g1035 425 Gene3D Transferase(Phosphotransferase) domain 1 176 391 - -
Dod03g1035 425 Gene3D Phosphorylase Kinase; domain 1 71 175 - -
Dod03g1035 425 SMART serkin_6 100 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1035 425 PANTHER KINASE PBS1, PUTATIVE-RELATED 15 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1035 Dod-Chr3 12606566 12609724 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1035 19 423 Receptor kinase-like Gene Family AT5G49760 60.591 1.41e-156 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod03g1035 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1035 - - aip:107638778 646.736