Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g1035 | ATGCTAATAGTCCCAATGGACTTTTTTCCTGACAAAAATCATGCACCCAGCGGGTCGAGTAACTCATCGAACACTGCAATCGTAATTGGAGCGGCAGTTGGCGGTTCTTCTGTCCTGCTTGTGCTATTGTTCCTTGCAGGTGTTTATGCTTTCCGCCAGAACAGAAGGGCAGAAAGAGCGATTTCGAGAAGCAATCCTTTTGGAAACTGGGATCCAAATAAAAGCAATTGTGGCACCCCTCAGATAACTGCAGCAAGGCAGTTCTCTTTTAAAGAACTTAAGAAATACACAAATAACTTTTCACAAGCCAATGATATTGGATCAGGAGGTTATGGAAAGGTTTATAAGGGAACTCTTCCCTCTGGGCAACTGATAGCCATAAAACGAGCTCTGAAAGAATCACAGCAGGGAGGGATAGAATTTAAAGCAGAGATTGAACTCCTTTCAAGGATCCACCACAAAAATCTGGTAAGCCTTGTGGGATTCTGCTTTGAACAAGGAGAACAAATGCTGGTTTATGAGTTTGTTCCAAATGGAAGTTTGAAGGATACTATCTCAGGGAAATCAGGCATTGTATTGAGCTGGAGGAGAAGGATAAAAGTAGCCCTTGGTGCAGCAAGGGGTTTGGCTTATCTTCATGAGCATGCCAATCCTCCTATTATACACAGGGACATCAAATCAAACAACATTTTGTTGGATGAGACCCTTGATGGAAAAGTTGCTGATTTTGGTCTCTCCAAACCTATGTTAGATTGTGGAAAAGATCATATTACCACTCAAGTCAAAGGAACACTGGGTTACTTGGATCCAGAATACTACACAAGTCAGCAGCTGACTGAGAAGAGTGATGTTTATAGTTTTGGAGTGCTGATGTTGGAGCTGATAACCGGAAGAAAGCCTATAGAACGAGGAAAATACATCGTGAAAGTGGTCAGGAACGTGATCGATAGGACTAAGGACTTGTATGGCCTTCATGAACTCCTTGACAAAGCCCTCAGGTCAGGGTCAAAACTGACTGGTTTTGAGAAGTTTGTGGATCTTGCAATGAAGTGTCTTGAAGAGTCAGGAGCTGAAAGGCCTGCAATGGGTGATGCAGTGACAGAGATTGAACTCATATTGCGCTCAGCTGGTTTGGACCCCACTTCTGAATCAACAGCATCCACTTCATCTAGTTTTAGACTCAATGAGGAAAACACAGGGAGTTCCCACCAGCCTTACAGCAATGAATCCTTGTATTCAAGTGCAGAACAGTTAACTACAAAGAAGGAGACTAGTTGA | 1278 | 0.4304 | MLIVPMDFFPDKNHAPSGSSNSSNTAIVIGAAVGGSSVLLVLLFLAGVYAFRQNRRAERAISRSNPFGNWDPNKSNCGTPQITAARQFSFKELKKYTNNFSQANDIGSGGYGKVYKGTLPSGQLIAIKRALKESQQGGIEFKAEIELLSRIHHKNLVSLVGFCFEQGEQMLVYEFVPNGSLKDTISGKSGIVLSWRRRIKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDETLDGKVADFGLSKPMLDCGKDHITTQVKGTLGYLDPEYYTSQQLTEKSDVYSFGVLMLELITGRKPIERGKYIVKVVRNVIDRTKDLYGLHELLDKALRSGSKLTGFEKFVDLAMKCLEESGAERPAMGDAVTEIELILRSAGLDPTSESTASTSSSFRLNEENTGSSHQPYSNESLYSSAEQLTTKKETS* | 426 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g1035 | 425 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 220 | 232 | IPR008271 | GO:0004672|GO:0006468 | |
Dod03g1035 | 425 | PANTHER | OS01G0253100 PROTEIN | 15 | 403 | IPR045271 | GO:0004714|GO:0006468 | |
Dod03g1035 | 425 | MobiDBLite | consensus disorder prediction | 379 | 425 | - | - | |
Dod03g1035 | 425 | ProSiteProfiles | Protein kinase domain profile. | 100 | 373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1035 | 425 | Pfam | Protein kinase domain | 101 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1035 | 425 | CDD | STKc_IRAK | 106 | 372 | - | - | |
Dod03g1035 | 425 | SUPERFAMILY | Protein kinase-like (PK-like) | 86 | 402 | IPR011009 | - | |
Dod03g1035 | 425 | ProSitePatterns | Protein kinases ATP-binding region signature. | 106 | 132 | IPR017441 | GO:0005524 | |
Dod03g1035 | 425 | Gene3D | Transferase(Phosphotransferase) domain 1 | 176 | 391 | - | - | |
Dod03g1035 | 425 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 175 | - | - | |
Dod03g1035 | 425 | SMART | serkin_6 | 100 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1035 | 425 | PANTHER | KINASE PBS1, PUTATIVE-RELATED | 15 | 403 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g1035 | Dod-Chr3 | 12606566 | 12609724 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g1035 | 19 | 423 | Receptor kinase-like Gene Family | AT5G49760 | 60.591 | 1.41e-156 | 465 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Dod03g1035 | Pkinase | 5.2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g1035 | - | - | aip:107638778 | 646.736 |