Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1033 ATGCAGGGAAGAGTTGAGTTTAAAACTGAGATTGAATTGCTGTCAAGGGTCCACCATAAAAATCTTGTTAGCCTACTCGGTTTCTGCTTTGACCAAGGAGAACAAATGCTAATTTATGAGTATGTTGCAAATGGCACTTTGAAGGATGCTCTTTCAGGCAAGTCAGGAATTAGATTGGACTGGATCAGAAGGCTAAAAGTAGTCCTTGGTGCTGCCAGGGGACTTGATTATCTGCATGAACTTGCCAATCCTCCTATCATACATAGGGATATCAAATCCACTAACATATTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGTCACTGGGTGATGGTGCAAAAGGTTACATCACCACTCAAGTCAAAGGAACAATGACGTAG 399 0.416 MQGRVEFKTEIELLSRVHHKNLVSLLGFCFDQGEQMLIYEYVANGTLKDALSGKSGIRLDWIRRLKVVLGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKSLGDGAKGYITTQVKGTMT* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1033 132 Gene3D Transferase(Phosphotransferase) domain 1 43 132 - -
Dod03g1033 132 PANTHER OS01G0253100 PROTEIN 2 131 IPR045271 GO:0004714|GO:0006468
Dod03g1033 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1033 132 SUPERFAMILY Protein kinase-like (PK-like) 3 131 IPR011009 -
Dod03g1033 132 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Dod03g1033 132 PANTHER KINASE PBS1, PUTATIVE-RELATED 2 131 - -
Dod03g1033 132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Dod03g1033 132 SMART serkin_6 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1033 132 Pfam Protein tyrosine and serine/threonine kinase 4 117 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1033 Dod-Chr3 12548568 12550643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1033 1 131 Receptor kinase-like Gene Family AT5G49760 76.336 5.09e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod03g1033 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1033 - - gmx:100780344 248.44