Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1017 ATGGGCATGGAGGACGAGATTTCTCCGGCCGATGCTCACAACATCACGAAAACCCCCGGCAAGGAGCAGCAGGCAGCGGGGGTCGGAATCCTGCTCCAGATCATGATGCTTGTCCTGTCGTTCGTGCTCGGCCATGTCCTCCGCCGCAAGAAGATTTACGTCATCCCCGAAGCCAGTGCCTCTCTCCTCATCGGCTTAATCGTCGGCATTCTCGCCAACATCTCCGACACCGAAACCAGCATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTCTTCCTGTTACCTCCCATCATATTTCAGTCTGGCTTCAGTCTTGCACCTAAACCCTTTTTCTCGAATTTTGGAGCAATTGTGACAATTGCAATATTTGGCACCCTTTTAGCTTCGATTGTGACGGGTGCCTTAGTTTATCTTGGTGGGCTGGTCTATCTCATGTATAGACTCCCTTTTGTTGAGTGCCTAATGTTTGGGGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGGCCATATTTCAGGAGCTTGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAGTCTGTTCTAAATGATGCTATGGCAATTTCTTTGTACAGAACAATGTCGTTGATTAAGATCCATCCATCTGGACTAAACTTATTCATGGTGCTGGTTAGATTTTTGGAGACTTTTTTTGGTTCATTGTCTGCAGGTGTTGGAGTTGGATTTATATCAGCTTTACTATTTAAGTATGCAGGGTTGGACATTGACAACCTTCAGAACTTGGAGAGTTGTCTTTTTGTTCTATTCCCTTATTTCTCGTACATGCTTACAGAAGGTCTTGGTCTGTCTGGTATTGTATCGATACTGTTTACGGGAATAGTCATGAAGCATTATACGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTCATATATATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCGCATGTTGGATTTATATTCTTCTCCATTATATTCATTGTAATTGCAAGGGCAGCAAATGTCTTCTCTTGTGCTTATCTGGTCAATCTGGTCAGACCTGCCCATCGAAAGATACCTCTAAATCACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCTCTTGCTTTGCAATCAGTTCATGACCTTCCAGAAGGACATGGTCAGACTATTGTTACTGCAACTACAGCAATTGTTGTTTTGACGGTATTATTGATTGGTGGATCAACATGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGTGACAGTCATGATGATAGCCCTCTGGCTTCAGTGGGTACCATCACAAATAATTATGAGGGAAACAATGGTTATATCGCTCCTTCTTATGATGAAGAATCATCATCAGGGAACAGAATCAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACTGCATTAGATAAAAACTATCTCACCCCATTCTTTACAAGTCAAAATGGAGATGATGACGATGACGACGAAGCGGAGCCTTTGACTTCTTCAAGATCGGGATTACATGGTCCTAACCGTTATTAA 1623 0.4258 MGMEDEISPADAHNITKTPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVIPEASASLLIGLIVGILANISDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTIAIFGTLLASIVTGALVYLGGLVYLMYRLPFVECLMFGALISATDPVTVLAIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLIKIHPSGLNLFMVLVRFLETFFGSLSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLTEGLGLSGIVSILFTGIVMKHYTYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIVIARAANVFSCAYLVNLVRPAHRKIPLNHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIVTATTAIVVLTVLLIGGSTCTMLEALDVVGGDSHDDSPLASVGTITNNYEGNNGYIAPSYDEESSSGNRIKMKLKEFHKSAASFTALDKNYLTPFFTSQNGDDDDDDEAEPLTSSRSGLHGPNRY* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1017 540 Gene3D - 153 204 - -
Dod03g1017 540 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g1017 540 Pfam Sodium/hydrogen exchanger family 36 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod03g1017 540 PANTHER SODIUM/HYDROGEN EXCHANGER 16 525 IPR018422 GO:0006812|GO:0015299|GO:0016021
Dod03g1017 540 MobiDBLite consensus disorder prediction 510 540 - -
Dod03g1017 540 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 34 449 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod03g1017 540 PANTHER SODIUM/HYDROGEN EXCHANGER 6 16 525 - -
Dod03g1017 540 PRINTS Na+/H+ exchanger signature 120 128 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod03g1017 540 PRINTS Na+/H+ exchanger signature 160 170 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod03g1017 540 PRINTS Na+/H+ exchanger signature 105 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod03g1017 540 PRINTS Na+/H+ exchanger signature 91 102 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1017 Dod-Chr3 12350194 12360467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1017 22 441 Antiporters AT3G05030 33.484 1.97e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1017 K14724 - gmx:100790830 872.463