Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1008 ATGTATCATCCAAAGAATGTCCCTAGTTCAAGTTTAATTGGAAGCAATTCATTAGTACATGGTGGCAATACTATGGATCCTGGCAATGGAGACGGTCTCACCAACAACCCTAATCTCACCTCAAAGCAACGTTTACGGTGGACACATGAGCTACATGAACGCTTTGTTGACGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGTGTCCTTAGAGTTATGGGTGTACAAGGCTTAACCATTTACCATGTCAAAAGCCACTTACAGAAATATCGACTAGCAAAGTACCTACCAGACTCTTCATCCGATGAAGGGAAAAAGGCCGACAAGAAAGAAACTGGGGACATGCTTTCCAATCTAGATGGTTCACCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAACGCCTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTAAGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATCGAAGAGCAGCAGCGGCTCAGCGGGGTTCTTTCAGAGGCACCTAGCTCTGGGGTTACAGGCCCGGTTCCGGAAGACATTTGCCCAAAACCTGATAATGAGACTGATCCGGCAACCCCTGACCCTGAAAAGGCTGTAAAAGAGCGTGCCCCGGCAAAGAGTCTTTCAATCGAATCATTTTCATCTCACCACGAGCCATTGACACCAGATTCCGGTTGCCATGATGGTTCCCCTGCTGACAGCCCCAAAGGGGAGAGATCAACCAAGAAGCAACGATTAAGCACAGAGGGCGCATATTCCAAACAGGACATGGTGCTTCCGCATCAGATACTGGAGTCAAGCATGGCATCATGCCAGCAACCAAGCACTGTTTTCCTTATGCAAGACCAATTTGCTCCTTCATTGGGTATGTCTGCTAGAAGTGGTGAGGAATTGGAGAAGGTTGGTGGCAGCAATCTGTGA 969 0.4768 MYHPKNVPSSSLIGSNSLVHGGNTMDPGNGDGLTNNPNLTSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPSSGVTGPVPEDICPKPDNETDPATPDPEKAVKERAPAKSLSIESFSSHHEPLTPDSGCHDGSPADSPKGERSTKKQRLSTEGAYSKQDMVLPHQILESSMASCQQPSTVFLMQDQFAPSLGMSARSGEELEKVGGSNL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1008 322 MobiDBLite consensus disorder prediction 8 39 - -
Dod03g1008 322 MobiDBLite consensus disorder prediction 178 274 - -
Dod03g1008 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 314 - -
Dod03g1008 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 99 IPR017930 -
Dod03g1008 322 Pfam MYB-CC type transfactor, LHEQLE motif 129 175 IPR025756 -
Dod03g1008 322 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Dod03g1008 322 MobiDBLite consensus disorder prediction 101 119 - -
Dod03g1008 322 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Dod03g1008 322 Coils Coil 132 152 - -
Dod03g1008 322 Gene3D - 41 100 - -
Dod03g1008 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 314 IPR044848 GO:0003700
Dod03g1008 322 MobiDBLite consensus disorder prediction 198 220 - -
Dod03g1008 322 MobiDBLite consensus disorder prediction 101 127 - -
Dod03g1008 322 MobiDBLite consensus disorder prediction 1 39 - -
Dod03g1008 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1008 Dod-Chr3 12271742 12277045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1008 77 322 G2-like Transcription Factor Family AT2G01060 64.173 4.29e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g1008 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1008 - - gmx:100786925 527.324