Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1007 ATGTATCCGAGGCTGATACACCCGCATGAAGGGATTGCTGGTCAGGAAGATGTTCAAGTTGGTGGCTCCCACAAAGGTGACCCTTGCCTTGTTTTGACTGCTGATCCAAAACCAAGACTTCGTTGGACTCAGGACCTCCATGAACGATTTGTTGATGCTGTCACCCAGCTTGGGGGTGCTAGCAAGGCTACTCCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATATAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATGTCGGGTTCATATCTAGAAAGCCCTGGTACTGATAACTCTTCTCCGAAGTTGCCTGCTTCTGATACAAATGAGGGTTATGAAATCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATCTGCAAGTAGAGGCGGAGAAGCACTTGCAGATTCGCCAAGATGCAGAGCAGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGTTGGCTGATCAATTTATCGGCACTTCAGTTATAGACACCGATAACCAAAAGTTTCAAGGGATTGGAAGCAAAGCACTGAGAGGTCCATTGGTTGATCCTCTTGGTTTTTACTCCATGCCATCTGCTGAGGTGACCGGAGTCAATGTCCCGGAAGAAGAAATTCCGCATAGTCTCCCGCCCCAAAGGGCTGATTGTTCAACTGAAAGTTGTCTAACCTCACATGAGACTTCTGGAGGATTGGCTTTAGAAGGATGTCTGGGTGATGGGAAAAGGAGGATGCTGGGCATGGACTCTGTGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCCCAAGGTAATAATCCTCATGGAATAACTAGGTATGGCATGTAG 933 0.4641 MYPRLIHPHEGIAGQEDVQVGGSHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGMSGSYLESPGTDNSSPKLPASDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFIGTSVIDTDNQKFQGIGSKALRGPLVDPLGFYSMPSAEVTGVNVPEEEIPHSLPPQRADCSTESCLTSHETSGGLALEGCLGDGKRRMLGMDSVAAPLIWSEAKMRTQAINVAQGNNPHGITRYGM* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1007 310 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 310 - -
Dod03g1007 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 310 IPR044848 GO:0003700
Dod03g1007 310 Pfam Myb-like DNA-binding domain 40 90 IPR001005 -
Dod03g1007 310 MobiDBLite consensus disorder prediction 95 129 - -
Dod03g1007 310 MobiDBLite consensus disorder prediction 112 127 - -
Dod03g1007 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 37 92 IPR006447 GO:0003677
Dod03g1007 310 Gene3D - 36 94 - -
Dod03g1007 310 SUPERFAMILY Homeodomain-like 37 93 IPR009057 -
Dod03g1007 310 Pfam MYB-CC type transfactor, LHEQLE motif 134 179 IPR025756 -
Dod03g1007 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 94 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1007 Dod-Chr3 12251235 12259626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1007 26 252 G2-like Transcription Factor Family AT3G24120 45.798 4.02e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g1007 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1007 - - gmx:100786397 549.28