Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0983 ATGCCTGCTGCAACACTAACTGAGACCTTGCACAGTTTGCACCACTCATCAGATGAAGGTGCCTCCTCTTCTTCTTCTTCGATGGACAGTAATAATAAGTCCCAAATGTTCAACAACTACTATGGCGGCAGCAGCACAAGCGTGAGCGAAATAGAGGAAGAGAACTCATCATCACACTTGTACTTGGATGATATTGGTCCCATGGCAACCATTAGTGAAGAGAATAACGAAGGGATTACTGAAGACAGTGTTTATGTTGCAGTTGGTAAGAGTGAGACAAGCATGGAAGCCCTCACATGGACACTCAAGAACTTGGCTACCCCATCTACCATAGTTTATCTCGTACATGTTTTCCCTGAGATCAAACACATTCCAAACCCATCTGTTGTTTCTGCTATGACAGTGGGAATGGGAATGGTACCAAAGAGCCAAGTGAGTCCTGAGCAGGTGGAGAGCTATATGGCCCAAGAAAGAGGCAAGAGAAGAGAGCTTCTTCACAAGTTCCTCCAAACATGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTGATTGAGAGTGATTTGGTTGCAAAGGCAATCGTGGACCTGATTCCAATTCTTCAAATAACAAAACTAGTTTTAGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAAGGAAAGGGAATGGCATAGCTGATCAGGTACTTCAGAACGCACCAGAAAGCTGCAAGGTGAGAATTGTGTGTGAAGGGAAGGAAGTTAGTGAAAAGATAACTGGGTCTCCCTCTCCTCGTGCCATTGGTAATGATACTTCCATGTCCCATAAAGGAAATCTGAAAAAAGATTCGGTTTCATGTATTTGTTTTAACTTTTAA 858 0.4289 MPAATLTETLHSLHHSSDEGASSSSSSMDSNNKSQMFNNYYGGSSTSVSEIEEENSSSHLYLDDIGPMATISEENNEGITEDSVYVAVGKSETSMEALTWTLKNLATPSTIVYLVHVFPEIKHIPNPSVVSAMTVGMGMVPKSQVSPEQVESYMAQERGKRRELLHKFLQTCSACKVKVDTILIESDLVAKAIVDLIPILQITKLVLGANKSQLRKLRSRKGNGIADQVLQNAPESCKVRIVCEGKEVSEKITGSPSPRAIGNDTSMSHKGNLKKDSVSCICFNF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0983 285 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 29 284 - -
Dod03g0983 285 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 83 239 - -
Dod03g0983 285 MobiDBLite consensus disorder prediction 1 36 - -
Dod03g0983 285 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 29 284 - -
Dod03g0983 285 Gene3D HUPs 75 252 IPR014729 -
Dod03g0983 285 CDD STK_N 83 245 - -
Dod03g0983 285 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0983 Dod-Chr3 11938729 11940698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0983 83 246 Plant U-box Gene Family AT5G57035 31.515 1.18e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0983 - - gmx:100781056 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2936 05 55291305 55292700 Dod03g0983 03 11938729 11940698 PCT