Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0979 ATGAGTTCTTTGCAGAATAAAGCGCAGCTGGTTGTGATTGCTCATGACGTGGACCCAACTGAATTGGTTGTCTGGCATCCTGCATTGTGCAGGAAGATAGAAATTCCTTACTGCATTGTTAAGGGCAAGGCCCGCTTGGGATCGGCAAGTTTTGCTAACTTAAATGACAAGTACGATGAGTACAGAAAGAAGTGGGGCGGTGGTATCATGGGTTCCAAATCCCAAGCCAAAACTAAGGCAAAGGAAAGGCTTCTAGCCAAGGAAGCTGCTCACAGGATGTCCTAG 285 0.4702 MSSLQNKAQLVVIAHDVDPTELVVWHPALCRKIEIPYCIVKGKARLGSASFANLNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAHRMS* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0979 94 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 51 92 - -
Dod03g0979 94 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 49 IPR004038 -
Dod03g0979 94 PANTHER BNAA03G47020D PROTEIN 5 48 - -
Dod03g0979 94 SUPERFAMILY L30e-like 5 49 IPR029064 -
Dod03g0979 94 Gene3D - 3 88 IPR029064 -
Dod03g0979 94 ProSitePatterns Ribosomal protein L7Ae signature. 30 47 IPR004037 GO:0042254|GO:1990904
Dod03g0979 94 PANTHER BNAA03G47020D PROTEIN 51 92 - -
Dod03g0979 94 PRINTS Ribosomal protein L7A/RS6 family signature 37 51 IPR018492 -
Dod03g0979 94 PRINTS Ribosomal protein L7A/RS6 family signature 27 37 IPR018492 -
Dod03g0979 94 PRINTS Ribosomal protein L7A/RS6 family signature 11 24 IPR018492 -
Dod03g0979 94 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0979 Dod-Chr3 11897847 11898404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0979 5 94 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 64.407 1.67e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0979 K02936 - csv:101213286 143.28